RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 SSC5DA1L4H1 1573 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 RFX7Q2KHR2 1363 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 B2RBV5 119 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 SNAP23O00161 211 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 WNT10BO00744 389 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 PLD2O14939 933 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 ADAM11O75078 769 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 TAF5LO75529 589 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 LIG1P18858 919 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 IL15P40933 162 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 GATA4P43694 442 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 ITKQ08881 620 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 NCAPHQ15003 741 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 RNF219Q5W0B1 726 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 TTLL5Q6EMB2 1281 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 SAPCD2Q86UD0 394 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 ZBTB46Q86UZ6 589 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 PPM1KQ8N3J5 372 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 SSH3Q8TE77 659 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 TBC1D22AQ8WUA7 517 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 WFDC12Q8WWY7 111 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 LPIN2Q92539 896 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 E2F7Q96AV8 911 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 MTMR8Q96EF0 704 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 NECAB3Q96P71 396 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 SMAD5Q99717 465 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 AKTIPQ9H8T0 292 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 BRMS1Q9HCU9 246 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 PRDM10Q9NQV6 1147 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 TMEM39AQ9NV64 488 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 INTS7Q9NVH2 962 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 GGA3Q9NZ52 723 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 SPEF1Q9Y4P9 236 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 PPP2R3BQ9Y5P8 575 aa7.01□□□□□ -1.29
TMEM39A-212ENST00000497993 COL2A1P02458 1487 aaPredicted RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 A0A1W2PQH9 124 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 FAM221AA4D161 298 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 F8W735 103 aaPredicted RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 ENC1O14682 589 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 TBX3O15119 743 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 DDX3YO15523 660 aaKnown RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 GNAI2P04899 355 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 HIBADHP31937 336 aaKnown RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 KCNJ4P48050 445 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 NLRP12P59046 1061 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 FAAP100Q0VG06 881 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 AP3B2Q13367 1082 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 CBX2Q14781 532 aaPredicted RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 MAPRE1Q15691 268 aaKnown RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 TMEM95Q3KNT9 176 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 HP1BP3Q5SSJ5 553 aaPredicted RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 DZIP1LQ8IYY4 767 aaKnown RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 AHI1Q8N157 1196 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 TMEM57Q8N5G2 664 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 MAGEB6Q8N7X4 407 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 HOOK2Q96ED9 719 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 GLIS2Q9BZE0 524 aaPredicted RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 EHMT1Q9H9B1 1298 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 NCOA5Q9HCD5 579 aaKnown RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 GPR108Q9NPR9 543 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 RPS6KL1Q9Y6S9 549 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 RBBP6Q7Z6E9 1792 aaKnown RBP7□□□□□ -1.29
TMEM39A-212ENST00000497993 MAST3O60307 1309 aa7□□□□□ -1.29
TMEM39A-212ENST00000497993 PDE4DIPQ5VU43 2346 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 MEGF11A6BM72 1044 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 MSTNO14793 375 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 ADCY3O60266 1144 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 CILPO75339 1184 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 EYA4O95677 639 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 IFIT1P09914 478 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 SLC5A1P13866 664 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 HTRA3P83110 453 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 CLCQ05315 142 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 MAP7Q14244 749 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 LRRFIP1Q32MZ4 808 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 TBC1D10BQ4KMP7 808 aaPredicted RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 INO80DQ53TQ3 878 aaPredicted RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 METTL24Q5JXM2 366 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 ACBD5Q5T8D3 534 aaPredicted RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 FKBP1CQ5VVH2 108 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 MRM1Q6IN84 353 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 CNNM4Q6P4Q7 775 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 KIAA1211Q6ZU35 1233 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 ACAD11Q709F0 780 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 LRRTM3Q86VH5 581 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 APOBEC3FQ8IUX4 373 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 KLHDC4Q8TBB5 520 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 WDR66Q8TBY9 1149 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 DCPSQ96C86 337 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 TM9SF2Q99805 663 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 TARS2Q9BW92 718 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 NRSN2Q9GZP1 204 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 GPN3Q9UHW5 284 aaPredicted RBP6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 ZNF180Q9UJW8 692 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 HDAC9Q9UKV0 1011 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 SCINQ9Y6U3 715 aa6.99□□□□□ -1.29
TMEM39A-212ENST00000497993 MGAMO43451 1857 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms