RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MIS18BP1Q6P0N0 1132 aa21.67■■□□□ 1.06
CCM2-216ENST00000488727 KPNA6O60684 536 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 MARCKSP29966 332 aaPredicted RBP21.66■■□□□ 1.06
CCM2-216ENST00000488727 PSMC6P62333 389 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 MTG1Q9BT17 334 aaPredicted RBP21.66■■□□□ 1.06
CCM2-216ENST00000488727 FAM237AA0A1B0GTK4 181 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 PSAPP07602 524 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 NDUFA8P51970 172 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 GRIN1Q05586 938 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 IQCB1Q15051 598 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 SWSAP1Q6NVH7 229 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 DTHD1Q6ZMT9 781 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 IGSF22Q8N9C0 903 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 RDM1Q8NG50 284 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 PPP1R13LQ8WUF5 828 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 SENP6Q9GZR1 1112 aaPredicted RBP21.66■■□□□ 1.06
CCM2-216ENST00000488727 ANO10Q9NW15 660 aa21.66■■□□□ 1.06
CCM2-216ENST00000488727 VWA3AA6NCI4 1184 aa21.65■■□□□ 1.06
CCM2-216ENST00000488727 GOLGA6L6A8MZA4 724 aa21.65■■□□□ 1.06
CCM2-216ENST00000488727 UGCGQ16739 394 aa21.65■■□□□ 1.06
CCM2-216ENST00000488727 TMEM266Q2M3C6 531 aa21.65■■□□□ 1.06
CCM2-216ENST00000488727 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.65■■□□□ 1.06
CCM2-216ENST00000488727 GLT1D1Q96MS3 346 aa21.65■■□□□ 1.06
CCM2-216ENST00000488727 GRIN2DO15399 1336 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 IGSF9BQ9UPX0 1349 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 A0A1B0GVL5 298 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 H3BRB1 525 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 HAS3O00219 553 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 BACH1O14867 736 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 CABYRO75952 493 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 STAT5BP51692 787 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 AFAP1L1Q8TED9 768 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 GLG1Q92896 1179 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 TIGD1Q96MW7 591 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 SMARCAD1Q9H4L7 1026 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 TUT1Q9H6E5 874 aaKnown RBP21.64■■□□□ 1.06
CCM2-216ENST00000488727 C11orf49Q9H6J7 331 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 AZI2Q9H6S1 392 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 STARD7Q9NQZ5 370 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 ZNF302Q9NR11 478 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 GABBR1Q9UBS5 961 aa21.64■■□□□ 1.06
CCM2-216ENST00000488727 FBXO2Q9UK22 296 aaPredicted RBP21.64■■□□□ 1.06
CCM2-216ENST00000488727 MAFBQ9Y5Q3 323 aaPredicted RBP21.64■■□□□ 1.06
CCM2-216ENST00000488727 MORC2Q9Y6X9 1032 aaPredicted RBP21.64■■□□□ 1.06
CCM2-216ENST00000488727 EPHA7Q15375 998 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 KIAA0753Q2KHM9 967 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 NECAB2Q7Z6G3 386 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 BANK1Q8NDB2 785 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 RGL1Q9NZL6 768 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 PP2D1A8MPX8 630 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 ATP4AP20648 1035 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 MARK3P27448 753 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 PSEN2P49810 448 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 CHMP4BP1P59074 171 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 PLCB2Q00722 1185 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 PDIA5Q14554 519 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 MFSD10Q14728 455 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 SARM1Q6SZW1 724 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 C11orf57Q6ZUT1 292 aaPredicted RBP21.63■■□□□ 1.05
CCM2-216ENST00000488727 PLPPR4Q7Z2D5 763 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 VTI1AQ96AJ9 217 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 EIF2AK1Q9BQI3 630 aaKnown RBP21.63■■□□□ 1.05
CCM2-216ENST00000488727 RNPEPQ9H4A4 650 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 WRAP73Q9P2S5 460 aaPredicted RBP21.63■■□□□ 1.05
CCM2-216ENST00000488727 LRWD1Q9UFC0 647 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 ZNF215Q9UL58 517 aaPredicted RBP21.63■■□□□ 1.05
CCM2-216ENST00000488727 HPSEQ9Y251 543 aa21.63■■□□□ 1.05
CCM2-216ENST00000488727 ZNF862O60290 1169 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 PFKFB1P16118 471 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 CDC25AP30304 524 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 ZNF75DP51815 510 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 NBPF20Q3BBV1 942 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 FAM160B1Q5W0V3 765 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 PDXDC2PQ6P474 469 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 DYDC2Q96IM9 177 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 HSD17B14Q9BPX1 270 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 KATNAL1Q9BW62 490 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 ERAP1Q9NZ08 941 aa21.62■■□□□ 1.05
CCM2-216ENST00000488727 SRPRBQ9Y5M8 271 aaKnown RBP21.62■■□□□ 1.05
CCM2-216ENST00000488727 CUTAO60888 179 aa21.61■■□□□ 1.05
CCM2-216ENST00000488727 CDC25BP30305 580 aa21.61■■□□□ 1.05
CCM2-216ENST00000488727 CYP4A11Q02928 519 aa21.61■■□□□ 1.05
CCM2-216ENST00000488727 ITGA7Q13683 1181 aa21.61■■□□□ 1.05
CCM2-216ENST00000488727 NAP1L5Q96NT1 182 aaPredicted RBP21.61■■□□□ 1.05
CCM2-216ENST00000488727 CLIC6Q96NY7 704 aa21.61■■□□□ 1.05
CCM2-216ENST00000488727 RAB34Q9BZG1 259 aa21.61■■□□□ 1.05
CCM2-216ENST00000488727 ALPK3Q96L96 1907 aa21.61■■□□□ 1.05
CCM2-216ENST00000488727 SLITRK3O94933 977 aa21.6■■□□□ 1.05
CCM2-216ENST00000488727 ZNF202O95125 648 aa21.6■■□□□ 1.05
CCM2-216ENST00000488727 P4HBP07237 508 aaKnown RBP21.6■■□□□ 1.05
CCM2-216ENST00000488727 ATN1P54259 1190 aaPredicted RBP21.6■■□□□ 1.05
CCM2-216ENST00000488727 TERF1P54274 439 aa21.6■■□□□ 1.05
CCM2-216ENST00000488727 CTTNQ14247 550 aaKnown RBP21.6■■□□□ 1.05
CCM2-216ENST00000488727 PLCB4Q15147 1175 aa21.6■■□□□ 1.05
CCM2-216ENST00000488727 CEP57L1Q8IYX8 460 aa21.6■■□□□ 1.05
CCM2-216ENST00000488727 LXNQ9BS40 222 aa21.6■■□□□ 1.05
CCM2-216ENST00000488727 MMTAG2Q9BU76 263 aaKnown RBP21.6■■□□□ 1.05
CCM2-216ENST00000488727 KIAA1468Q9P260 1216 aa21.6■■□□□ 1.05
CCM2-216ENST00000488727 A0A0U1RQG5 324 aaPredicted RBP21.6■■□□□ 1.05
CCM2-216ENST00000488727 MED24O75448 989 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms