RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 BTG3Q14201 252 aaPredicted RBP7.6□□□□□ -1.19
FN1-220ENST00000480024 TCEAL5Q5H9L2 206 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 IER5Q5VY09 327 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 FAM160B1Q5W0V3 765 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 BLOC1S2Q6QNY1 142 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 PLPPR4Q7Z2D5 763 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 CCDC60Q8IWA6 550 aaPredicted RBP7.6□□□□□ -1.19
FN1-220ENST00000480024 TEX2Q8IWB9 1127 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 CKAP2LQ8IYA6 745 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 REXO1Q8N1G1 1221 aaKnown RBP7.6□□□□□ -1.19
FN1-220ENST00000480024 BANK1Q8NDB2 785 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 RASGRP4Q8TDF6 673 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 PHKBQ93100 1093 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 CCDC136Q96JN2 1154 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 PPP1R16BQ96T49 567 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 GLT8D2Q9H1C3 349 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
FN1-220ENST00000480024 TCEAL9Q9UHQ7 104 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 GINS2Q9Y248 185 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 SNX14Q9Y5W7 946 aa7.6□□□□□ -1.19
FN1-220ENST00000480024 NID2Q14112 1375 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 IGSF9BQ9UPX0 1349 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 IGLV3-22A0A075B6J6 115 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 SMIM35A0A1B0GVV1 85 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 ESYT2A0FGR8 921 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 H3BQ06 376 aaPredicted RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 IPO5O00410 1097 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 ENPP3O14638 875 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 RPLP2P05387 115 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 LINC00271P0C7V0 271 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 IL9P15248 144 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 RPS6KB1P23443 525 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 KLRC1P26715 233 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 SLC26A2P50443 739 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 KRT76Q01546 638 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 PKN1Q16512 942 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 TMEM266Q2M3C6 531 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 LEXMQ3ZCV2 418 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 PAN2Q504Q3 1202 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 PRR16Q569H4 304 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 PTCRAQ6ISU1 281 aaPredicted RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 MIS18BP1Q6P0N0 1132 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 PDXDC2PQ6P474 469 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 MTHFD1LQ6UB35 978 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 ABHD15Q6UXT9 468 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 NIPA1Q7RTP0 329 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 TRMT1LQ7Z2T5 733 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 ATP8B4Q8TF62 1192 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 CCDC12Q8WUD4 166 aaPredicted RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 KHSRPQ92945 711 aaKnown RBP eCLIP7.59□□□□□ -1.19
FN1-220ENST00000480024 KCNB2Q92953 911 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 TNPO1Q92973 898 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 ZNF577Q9BSK1 485 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 C11orf84Q9BUA3 381 aaPredicted RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 SLC26A6Q9BXS9 759 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 CELF4Q9BZC1 486 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 ZMYND12Q9H0C1 365 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 NSUN3Q9H649 340 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 NCOA5Q9HCD5 579 aaKnown RBP7.59□□□□□ -1.19
FN1-220ENST00000480024 C6orf50Q9HD87 102 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 ZNF302Q9NR11 478 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 PADI3Q9ULW8 664 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 RWDD3Q9Y3V2 267 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 PCDHA2Q9Y5H9 948 aa7.59□□□□□ -1.19
FN1-220ENST00000480024 FNDC1Q4ZHG4 1894 aaPredicted RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 PLXNA4Q9HCM2 1894 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 MUC6Q6W4X9 2439 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 IGKV6D-21A0A0A0MT36 114 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 C5orf67F2Z3F1 127 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 GRM6O15303 877 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 DHX15O43143 795 aaKnown RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 PRPF3O43395 683 aaKnown RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 HBP1O60381 514 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 DGKIO75912 1065 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 REC8O95072 547 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 ATG7O95352 703 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 CYP3A4P08684 503 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 SSTR3P32745 418 aaPredicted RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 BMPR1AP36894 532 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 GATMP50440 423 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 CCT2P78371 535 aaKnown RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 AKAP17AQ02040 695 aaKnown RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 SWSAP1Q6NVH7 229 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 NPAS4Q8IUM7 802 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 CCDC148Q8NFR7 591 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 CRYGNQ8WXF5 182 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 ZNF689Q96CS4 500 aaPredicted RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 C1QTNF1Q9BXJ1 281 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 FTHL17Q9BXU8 183 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 TMX1Q9H3N1 280 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 EPHX3Q9H6B9 360 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 CD320Q9NPF0 282 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 CLDND1Q9NY35 253 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 VPS54Q9P1Q0 977 aa7.58□□□□□ -1.2
FN1-220ENST00000480024 MRPL42Q9Y6G3 142 aaKnown RBP7.58□□□□□ -1.2
FN1-220ENST00000480024 COL1A2P08123 1366 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms