RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 STK4Q13043 487 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 RPS6KA1Q15418 735 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 KBTBD12Q3ZCT8 623 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 COBLL1Q53SF7 1204 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 TDRD12Q587J7 1177 aaKnown RBP11.48□□□□□ -0.57
ABCF1-205ENST00000475993 SAPCD2Q86UD0 394 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 KIF2BQ8N4N8 673 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 PRMT1Q99873 361 aaKnown RBP11.48□□□□□ -0.57
ABCF1-205ENST00000475993 SELENOSQ9BQE4 189 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 EPB41L4BQ9H329 900 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 ABCB11O95342 1321 aa11.48□□□□□ -0.57
ABCF1-205ENST00000475993 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-205ENST00000475993 CCDC188H7C350 402 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 DESP17661 470 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 FUT4P22083 530 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 PDE6CP51160 858 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 USP11P51784 963 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 MAN2A1Q16706 1144 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 SLC9C1Q4G0N8 1177 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 LRRC15Q8TF66 581 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 MAIP1Q8WWC4 291 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 SYN2Q92777 582 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-205ENST00000475993 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
ABCF1-205ENST00000475993 SLITRK6Q9H5Y7 841 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 ZWILCHQ9H900 591 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 PHF24Q9UPV7 400 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 STK38LQ9Y2H1 464 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 USP15Q9Y4E8 981 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-205ENST00000475993 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 E7ENQ6 273 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 TLR2O60603 784 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 PLEKHA8P1O95397 391 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 SHBGP04278 402 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 SERPING1P05155 500 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-205ENST00000475993 ADAM9Q13443 819 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 HLFQ16534 295 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 SYT15Q9BQS2 421 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 AP1M1Q9BXS5 423 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 SEMA6BQ9H3T3 888 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 FAM114A2Q9NRY5 505 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 RHBDL2Q9NX52 303 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 RIC1Q4ADV7 1423 aa11.47□□□□□ -0.57
ABCF1-205ENST00000475993 BTNL10A8MVZ5 291 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 PGRMC1O00264 195 aaKnown RBP11.46□□□□□ -0.57
ABCF1-205ENST00000475993 ATP6V1C1P21283 382 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 PDE4DQ08499 809 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 DYNC1I2Q13409 638 aaKnown RBP11.46□□□□□ -0.57
ABCF1-205ENST00000475993 SLC18A3Q16572 532 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 LMNTD2Q8IXW0 634 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.46□□□□□ -0.571e-9■■□□□ 11.6
ABCF1-205ENST00000475993 TBC1D7Q9P0N9 293 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 AMACRQ9UHK6 382 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 GGT7Q9UJ14 662 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
ABCF1-205ENST00000475993 BZW2Q9Y6E2 419 aaKnown RBP11.46□□□□□ -0.57
ABCF1-205ENST00000475993 BCL9O00512 1426 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 CEP104O60308 925 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 HIP1RO75146 1068 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 E2F6O75461 281 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 CENPPQ6IPU0 288 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 AGAP3Q96P47 875 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 CCSER1Q9C0I3 900 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 NACA2Q9H009 215 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 ATP8A1Q9Y2Q0 1164 aa11.46□□□□□ -0.57
ABCF1-205ENST00000475993 NOC2LQ9Y3T9 749 aaKnown RBP11.46□□□□□ -0.57
ABCF1-205ENST00000475993 TNKSO95271 1327 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 PP2D1A8MPX8 630 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 FCER1AP12319 257 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 CCNB1P14635 433 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 RPL13P26373 211 aaKnown RBP11.46□□□□□ -0.58
ABCF1-205ENST00000475993 C16orf87Q6PH81 154 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 RNF168Q8IYW5 571 aaPredicted RBP11.46□□□□□ -0.58
ABCF1-205ENST00000475993 TTC5Q8N0Z6 440 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 TRIM9Q9C026 710 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 MAGEF1Q9HAY2 307 aa11.46□□□□□ -0.58
ABCF1-205ENST00000475993 NKX1-2Q9UD57 310 aaPredicted RBP11.46□□□□□ -0.58
ABCF1-205ENST00000475993 CCDC169A6NNP5 214 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 O00370 1275 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 TTI1O43156 1089 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 GJB6O95452 261 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 SKIV2L2P42285 1042 aaKnown RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 APBB1IPQ7Z5R6 666 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 TBC1D16Q8TBP0 767 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 ATP8B4Q8TF62 1192 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 FMO2Q99518 471 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 PACSIN1Q9BY11 444 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 ARMT1Q9H993 441 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 RNPEPL1Q9HAU8 725 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 TMEM98Q9Y2Y6 226 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 ATP6V0A2Q9Y487 856 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 BCORQ6W2J9 1755 aa11.45□□□□□ -0.58
ABCF1-205ENST00000475993 COL22A1Q8NFW1 1626 aaPredicted RBP11.45□□□□□ -0.58
ABCF1-205ENST00000475993 KRIT1O00522 736 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms