RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 NSUN3Q9H649 340 aaKnown RBP11.21□□□□□ -0.61
NUDCD3-205ENST00000472246 PADI3Q9ULW8 664 aa11.21□□□□□ -0.61
NUDCD3-205ENST00000472246 TRPV2Q9Y5S1 764 aa11.21□□□□□ -0.61
NUDCD3-205ENST00000472246 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 C5orf67F2Z3F1 127 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 M0QZ92 97 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 DGKIO75912 1065 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 ATG7O95352 703 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 IBSPP21815 317 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 BMPR1AP36894 532 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 GATMP50440 423 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 METAP2P50579 478 aaKnown RBP eCLIP11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 KRT32Q14532 448 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 PFKFB3Q16875 520 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 IER5Q5VY09 327 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 RTN4RL1Q86UN2 441 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 PLA2G4DQ86XP0 818 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 CLP1Q92989 425 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 PABPC5Q96DU9 382 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 CLDND1Q9NY35 253 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 PCDHA2Q9Y5H9 948 aa11.2□□□□□ -0.62
NUDCD3-205ENST00000472246 IGLV3-22A0A075B6J6 115 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 IGKV6D-21A0A0A0MT36 114 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 SMIM35A0A1B0GVV1 85 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 BACH1O14867 736 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 RB1P06400 928 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 SCG2P13521 617 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 RCAN1P53805 252 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 FGD1P98174 961 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 PAK2Q13177 524 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 COL19A1Q14993 1142 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 TMEM266Q2M3C6 531 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 PAN2Q504Q3 1202 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 ABHD15Q6UXT9 468 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 Q6ZUG5 572 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 TEX2Q8IWB9 1127 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 GJD3Q8N144 294 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 ATP8B4Q8TF62 1192 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 CRYGNQ8WXF5 182 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 BRF1Q92994 677 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 JAKMIP1Q96N16 626 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 C11orf84Q9BUA3 381 aaPredicted RBP11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 TMX1Q9H3N1 280 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 ALG13Q9NP73 1137 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 GINS2Q9Y248 185 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 RWDD3Q9Y3V2 267 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 MRPL42Q9Y6G3 142 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
NUDCD3-205ENST00000472246 KDM3AQ9Y4C1 1321 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 IPO5O00410 1097 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 DHX15O43143 795 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 HBP1O60381 514 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 MGEA5O60502 916 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 ATP4AP20648 1035 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 KLRC1P26715 233 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 GTF2F1P35269 517 aaKnown RBP eCLIP11.18□□□□□ -0.622e-8■■■■■ 30.8
NUDCD3-205ENST00000472246 LTBRP36941 435 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 SLC26A2P50443 739 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 KRT76Q01546 638 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 DLX2Q07687 328 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 HYAL1Q12794 435 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 CLUL1Q15846 466 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 PKN1Q16512 942 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 TMEM31Q5JXX7 168 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 FAM160B1Q5W0V3 765 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 PDXDC2PQ6P474 469 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 NIPA1Q7RTP0 329 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 NPAS4Q8IUM7 802 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 CMTR2Q8IYT2 770 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 CRIPAKQ8N1N5 446 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 RASGRP4Q8TDF6 673 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 TMEM40Q8WWA1 233 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 TNPO1Q92973 898 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 PHKBQ93100 1093 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 PPP1R16BQ96T49 567 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 LMAN2LQ9H0V9 348 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 GLT8D2Q9H1C3 349 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 ZNF302Q9NR11 478 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 EVPLQ92817 2033 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
NUDCD3-205ENST00000472246 NID2Q14112 1375 aa11.17□□□□□ -0.62
NUDCD3-205ENST00000472246 ESYT2A0FGR8 921 aa11.17□□□□□ -0.62
NUDCD3-205ENST00000472246 ZBTB42B2RXF5 422 aa11.17□□□□□ -0.62
NUDCD3-205ENST00000472246 PI4K2BG5E9Z4 385 aa11.17□□□□□ -0.62
NUDCD3-205ENST00000472246 LINC01565O15544 149 aa11.17□□□□□ -0.62
NUDCD3-205ENST00000472246 MMP1P03956 469 aa11.17□□□□□ -0.62
NUDCD3-205ENST00000472246 CYP3A4P08684 503 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms