RNA–Protein interactions for RNA: ENST00000471739.1

FYCO1-204, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 4

Gene FYCO1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-204ENST00000471739 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
FYCO1-204ENST00000471739 ZNF689Q96CS4 500 aaPredicted RBP13.92□□□□□ -0.18
FYCO1-204ENST00000471739 NSUN3Q9H649 340 aaKnown RBP13.92□□□□□ -0.18
FYCO1-204ENST00000471739 IGSF9BQ9UPX0 1349 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 KDM3AQ9Y4C1 1321 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 IGKV6D-21A0A0A0MT36 114 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 ESYT2A0FGR8 921 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 FAM86B1E9PN63 330 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 BACH1O14867 736 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 DGKIO75912 1065 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 CYP3A4P08684 503 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 FAM86B2P0C5J1 330 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 SCG2P13521 617 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 ADD1P35611 737 aaKnown RBP13.91□□□□□ -0.18
FYCO1-204ENST00000471739 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 PAK2Q13177 524 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 BTG3Q14201 252 aaPredicted RBP13.91□□□□□ -0.18
FYCO1-204ENST00000471739 COL19A1Q14993 1142 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 JAKMIP3Q5VZ66 844 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 FAM160B1Q5W0V3 765 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 MCTP2Q6DN12 878 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 PTCRAQ6ISU1 281 aaPredicted RBP13.91□□□□□ -0.18
FYCO1-204ENST00000471739 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 PLA2G4DQ86XP0 818 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 NEK9Q8TD19 979 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 CCDC12Q8WUD4 166 aaPredicted RBP13.91□□□□□ -0.18
FYCO1-204ENST00000471739 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 KCNB2Q92953 911 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
FYCO1-204ENST00000471739 CELF4Q9BZC1 486 aaKnown RBP13.91□□□□□ -0.18
FYCO1-204ENST00000471739 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 EPHX3Q9H6B9 360 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 RAPGEFL1Q9UHV5 662 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
FYCO1-204ENST00000471739 IGLV3-22A0A075B6J6 115 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 DDX39AO00148 427 aaKnown RBP13.9□□□□□ -0.18
FYCO1-204ENST00000471739 IPO5O00410 1097 aaKnown RBP13.9□□□□□ -0.18
FYCO1-204ENST00000471739 NCK2O43639 380 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 HBP1O60381 514 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 CPA1P15085 419 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 KRT76Q01546 638 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 APOBRQ0VD83 1088 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.18
FYCO1-204ENST00000471739 Q6ZUG5 572 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
FYCO1-204ENST00000471739 NPAS4Q8IUM7 802 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 FAM178BQ8IXR5 827 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 REXO1Q8N1G1 1221 aaKnown RBP13.9□□□□□ -0.18
FYCO1-204ENST00000471739 CRIPAKQ8N1N5 446 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 CRYGNQ8WXF5 182 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 BRF1Q92994 677 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
FYCO1-204ENST00000471739 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 ZMYND12Q9H0C1 365 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 CD320Q9NPF0 282 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 RALGAPA2Q2PPJ7 1873 aa13.9□□□□□ -0.18
FYCO1-204ENST00000471739 NLRC5Q86WI3 1866 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 COL1A2P08123 1366 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 NID2Q14112 1375 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 H3BQ06 376 aaPredicted RBP13.89□□□□□ -0.19
FYCO1-204ENST00000471739 GRM6O15303 877 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 DHX15O43143 795 aaKnown RBP13.89□□□□□ -0.19
FYCO1-204ENST00000471739 STAG3L1P0CL83 205 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 KLRC1P26715 233 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 SETQ01105 290 aaPredicted RBP13.89□□□□□ -0.19
FYCO1-204ENST00000471739 MIS18BP1Q6P0N0 1132 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 PDXDC2PQ6P474 469 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 EP400NLQ6ZTU2 488 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 CCDC60Q8IWA6 550 aaPredicted RBP13.89□□□□□ -0.19
FYCO1-204ENST00000471739 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
FYCO1-204ENST00000471739 GJD3Q8N144 294 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 FBXL16Q8N461 479 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 ZNF577Q9BSK1 485 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 ZNF302Q9NR11 478 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 TBC1D22BQ9NU19 505 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 FAM50BQ9Y247 325 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 PIEZO1Q92508 2521 aa13.89□□□□□ -0.19
FYCO1-204ENST00000471739 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
FYCO1-204ENST00000471739 IL9P15248 144 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 GNA11P29992 359 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 HSPA4P34932 840 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 PKN1Q16512 942 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 ZNF484Q5JVG2 852 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 TMEM31Q5JXX7 168 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 ZNF746Q6NUN9 644 aaPredicted RBP13.88□□□□□ -0.19
FYCO1-204ENST00000471739 SWSAP1Q6NVH7 229 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 KIAA0319LQ8IZA0 1049 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 KHSRPQ92945 711 aaKnown RBP eCLIP13.88□□□□□ -0.19
FYCO1-204ENST00000471739 P2RX5Q93086 422 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 LRFN3Q9BTN0 628 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 TMX1Q9H3N1 280 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 CLDND1Q9NY35 253 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
FYCO1-204ENST00000471739 MRPL42Q9Y6G3 142 aaKnown RBP13.88□□□□□ -0.19
FYCO1-204ENST00000471739 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms