RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ANKS3Q6ZW76 656 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 ZNF70Q9UC06 446 aaPredicted RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 MAPK4P31152 587 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 PDE1BQ01064 536 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 PNOCQ13519 176 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 PLEKHH3Q7Z736 793 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 TSC1Q92574 1164 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 EHD2Q9NZN4 543 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 ZNF212Q9UDV6 495 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 HERC5Q9UII4 1024 aaKnown RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 HMGB1P1B2RPK0 211 aaPredicted RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 GSTA4O15217 222 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 CREB3O43889 395 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 PAMP19021 973 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 PDIA3P30101 505 aaKnown RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 HPDP32754 393 aaPredicted RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 MORC3Q14149 939 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 CCDC186Q7Z3E2 898 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 CSGALNACT1Q8TDX6 532 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 MRPL4Q9BYD3 311 aaKnown RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 POLR3FQ9H1D9 316 aaPredicted RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 FAM47DPA6NHR8 397 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 EIF3CLB5ME19 914 aaKnown RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 SLC25A27O95847 323 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 FDX1P10109 184 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 ADD2P35612 726 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 LONP1P36776 959 aaKnown RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 PRELPP51888 382 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 SYTL3Q4VX76 610 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 MAP1SQ66K74 1059 aaPredicted RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 CCDC121Q6ZUS5 278 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 CELF1Q92879 486 aaKnown RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 FGD4Q96M96 766 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 EIF3CQ99613 913 aaKnown RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 TBC1D22BQ9NU19 505 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 MROH7-TTC4A0A0A0MT08 1334 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 TTLL13PA6NNM8 815 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 CDC42EP1Q00587 391 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 OOSP2Q86WS3 158 aa9.25□□□□□ -0.93
CD47-204ENST00000471694 UBE2TQ9NPD8 197 aaPredicted RBP9.25□□□□□ -0.93
CD47-204ENST00000471694 MANSC4A6NHS7 340 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 MYO1FO00160 1098 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 LAD1O00515 517 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 TMCC1O94876 653 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 RPN1P04843 607 aaKnown RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 YWHAHQ04917 246 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 TAS2R42Q7RTR8 314 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 MUC3BQ9H195 1237 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 KIF1BO60333 1816 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 CFAP69A5D8W1 941 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 E5RI56 91 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 LRRN2O75325 713 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 ATF2P15336 505 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 NR2F2P24468 414 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 NLRP12P59046 1061 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 AMPD2Q01433 879 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 KRT76Q01546 638 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 STRIP1Q5VSL9 837 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 TRMT44Q8IYL2 757 aaKnown RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 PCSK9Q8NBP7 692 aaKnown RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 HVCN1Q96D96 273 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 ZNF560Q96MR9 790 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 SLC25A13Q9UJS0 675 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 ZCCHC11Q5TAX3 1644 aaKnown RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 KCNJ18B7U540 433 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 HGSO14964 777 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 ZBTB7BO15156 539 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 BUB1BO60566 1050 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 KCNJ12Q14500 433 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 ADCK2Q7Z695 626 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 MCPH1Q8NEM0 835 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 OTUD7AQ8TE49 926 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 ZWILCHQ9H900 591 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 NDFIP2Q9NV92 336 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 STK17AQ9UEE5 414 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 HNRNPCL2B2RXH8 293 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 SPTLC1O15269 473 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 HNRNPCL1O60812 293 aaKnown RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 ADD1P35611 737 aaKnown RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 DGKZQ13574 1117 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 MESDQ14696 234 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 ZNF394Q53GI3 561 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 CEP68Q76N32 757 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 TRIM62Q9BVG3 475 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 COLEC11Q9BWP8 271 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 EDEM3Q9BZQ6 932 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 EVA1BQ9NVM1 165 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 DPP7Q9UHL4 492 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 ERVK-7P63135 1459 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 A8MXQ7 604 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 JAK2O60674 1132 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 SNX2O60749 519 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 AMHP03971 560 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 NT5DC4Q86YG4 428 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 MAGEB10Q96LZ2 347 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 RMDN2Q96LZ7 410 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 NAPGQ99747 312 aaPredicted RBP9.24□□□□□ -0.93
CD47-204ENST00000471694 SLC9A2Q9UBY0 812 aa9.24□□□□□ -0.93
CD47-204ENST00000471694 SYNCRIPO60506 623 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms