RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 MAPKAPK2P49137 400 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 KRT85P78386 507 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 PRR5P85299 388 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 PDCD1Q15116 288 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 PCBP2Q15366 365 aaKnown RBP eCLIP5.37□□□□□ -1.55
PRPF3-204ENST00000470824 ADGRF1Q5T601 910 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 MYO1HQ8N1T3 1032 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 RELTQ969Z4 430 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 INTS4Q96HW7 963 aaKnown RBP5.37□□□□□ -1.55
PRPF3-204ENST00000470824 ZNF496Q96IT1 587 aaPredicted RBP5.37□□□□□ -1.55
PRPF3-204ENST00000470824 PCGF6Q9BYE7 350 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 SLC6A17Q9H1V8 727 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 IP6K2Q9UHH9 426 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 ASB1Q9Y576 335 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.36□□□□□ -1.55
PRPF3-204ENST00000470824 OR14I1A6ND48 311 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 RASSF10A6NK89 507 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 ABLIM1O14639 778 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 RFPL1O75677 317 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 MMEP08473 750 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 PDE6BP35913 854 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 GPR3P46089 330 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 CLUL1Q15846 466 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 TIGD7Q6NT04 549 aaPredicted RBP5.36□□□□□ -1.55
PRPF3-204ENST00000470824 RPTNQ6XPR3 784 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 TTLL7Q6ZT98 887 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 ESPNLQ6ZVH7 1005 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 PHYKPLQ8IUZ5 450 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 CMIPQ8IY22 773 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 C7orf31Q8N865 590 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 HIPK4Q8NE63 616 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 JPH3Q8WXH2 748 aaPredicted RBP5.36□□□□□ -1.55
PRPF3-204ENST00000470824 ASB15Q8WXK1 588 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 ERCC4Q92889 916 aaPredicted RBP5.36□□□□□ -1.55
PRPF3-204ENST00000470824 RTFDC1Q9BY42 306 aaPredicted RBP5.36□□□□□ -1.55
PRPF3-204ENST00000470824 TCF7L1Q9HCS4 588 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 DTLQ9NZJ0 730 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 ANKRD6Q9Y2G4 727 aa5.36□□□□□ -1.55
PRPF3-204ENST00000470824 UBA6A0AVT1 1052 aaPredicted RBP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 LCHNA4D1U4 455 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 KLHL33A6NCF5 533 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 GOLGA6L22H0YM25 854 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 FZD9O00144 591 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 PRC1O43663 620 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 TMEM253P0C7T8 217 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 U2AF1L5P0DN76 240 aaPredicted RBP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 U2AF1Q01081 240 aaKnown RBP eCLIP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 DBPQ10586 325 aaPredicted RBP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 FAM102BQ5T8I3 360 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 FYB2Q5VWT5 728 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 ZC3H14Q6PJT7 736 aaKnown RBP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 ATG4DQ86TL0 474 aaPredicted RBP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 FAM126BQ8IXS8 530 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 TCEAL8Q8IYN2 117 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 ABI1Q8IZP0 508 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 TOE1Q96GM8 510 aaKnown RBP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 TUBGCP5Q96RT8 1024 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 ANO3Q9BYT9 981 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 RHOBTB2Q9BYZ6 727 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 NGRNQ9NPE2 291 aaKnown RBP5.35□□□□□ -1.55
PRPF3-204ENST00000470824 HSPBP1Q9NZL4 362 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 KLHL14Q9P2G3 628 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 ARHGAP28Q9P2N2 729 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 GIT1Q9Y2X7 761 aa5.35□□□□□ -1.55
PRPF3-204ENST00000470824 PRAMEF22A3QJZ6 481 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 GOLGA6CA6NDK9 693 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 GOLGA6BA6NDN3 693 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 XPOTO43592 962 aaKnown RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 H2AFYO75367 372 aaKnown RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 LRG1P02750 347 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 GOLGA6DP0CG33 693 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 ATF3P18847 181 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 AOAHP28039 575 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 YBX1P67809 324 aaKnown RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 FSCN1Q16658 493 aaKnown RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 PLEKHN1Q494U1 663 aaPredicted RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 TMEM240Q5SV17 173 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 EFCAB2Q5VUJ9 269 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 PRAMEF18Q5VWM3 479 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 OLFML2BQ68BL8 750 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 NXNQ6DKJ4 435 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 ETV3LQ6ZN32 361 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 RTN4RL1Q86UN2 441 aaPredicted RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 AMIGO3Q86WK7 504 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 CXorf67Q86X51 503 aaPredicted RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 MIB1Q86YT6 1006 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 IRF2BP1Q8IU81 584 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 CILP2Q8IUL8 1156 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 CPA6Q8N4T0 437 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 TGFBRAP1Q8WUH2 860 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 ALG3Q92685 438 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 FOXRED1Q96CU9 486 aaPredicted RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 DDX11Q96FC9 970 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 MAML3Q96JK9 1138 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 ORAI2Q96SN7 254 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 WNT8AQ9H1J5 351 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 CCM2LQ9NUG4 571 aaPredicted RBP5.34□□□□□ -1.55
PRPF3-204ENST00000470824 GOLGA6AQ9NYA3 693 aa5.34□□□□□ -1.55
PRPF3-204ENST00000470824 NOB1Q9ULX3 412 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms