RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 NEK4P51957 841 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 ANKRD1Q15327 319 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 PLEKHG4Q58EX7 1191 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 MIS18BP1Q6P0N0 1132 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 TAF2Q6P1X5 1199 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 ABHD15Q6UXT9 468 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 TEX2Q8IWB9 1127 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 PHOSPHO2Q8TCD6 241 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 GDPD5Q8WTR4 605 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 GINS2Q9Y248 185 aa10.97□□□□□ -0.65
USP54-207ENST00000451492 STK36Q9NRP7 1315 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 RRN3P2A6NIE6 340 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 M0QZ92 97 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 GAS7O60861 476 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 EFCAB14O75071 495 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 GJB5O95377 273 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 PSAPP07602 524 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 MRPS6P82932 125 aaKnown RBP10.96□□□□□ -0.65
USP54-207ENST00000451492 KRT76Q01546 638 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 TAP1Q03518 808 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 MGAT3Q09327 533 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 NONOQ15233 471 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP54-207ENST00000451492 NPY5RQ15761 445 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 ME3Q16798 604 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 INF2Q27J81 1249 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 LRCH2Q5VUJ6 765 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 KRT40Q6A162 431 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 PLPPR4Q7Z2D5 763 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 LENG9Q96B70 501 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 TEKT3Q9BXF9 490 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 TBC1D22BQ9NU19 505 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 ORC3Q9UBD5 711 aaPredicted RBP10.96□□□□□ -0.65
USP54-207ENST00000451492 GABBR1Q9UBS5 961 aa10.96□□□□□ -0.65
USP54-207ENST00000451492 CCDC194A0A1B0GVG4 234 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
USP54-207ENST00000451492 MBLAC1A4D2B0 266 aaPredicted RBP10.95□□□□□ -0.66
USP54-207ENST00000451492 EDIL3O43854 480 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 ATG7O95352 703 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 CTDNEP1O95476 244 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 XBP1P17861 261 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 ATP4AP20648 1035 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 KLRC1P26715 233 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 CD52P31358 61 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 CIITAP33076 1130 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 LPIN1Q14693 890 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 SKIV2LQ15477 1246 aaKnown RBP10.95□□□□□ -0.66
USP54-207ENST00000451492 UGCGQ16739 394 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 LETM2Q2VYF4 491 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 ZNF746Q6NUN9 644 aaPredicted RBP10.95□□□□□ -0.66
USP54-207ENST00000451492 MTHFD1LQ6UB35 978 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 PIK3AP1Q6ZUJ8 805 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 DAGLBQ8NCG7 672 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 OXER1Q8TDS5 423 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 ATP8B4Q8TF62 1192 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 GTF3C6Q969F1 213 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 RAD9AQ99638 391 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 PHF20Q9BVI0 1012 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 UNC45AQ9H3U1 944 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 TRPV2Q9Y5S1 764 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 XIRP2A4UGR9 3374 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 A0A0C4DFX4 3053 aa10.95□□□□□ -0.66
USP54-207ENST00000451492 IGSF9BQ9UPX0 1349 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 IGKV6D-21A0A0A0MT36 114 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 LINC01553A4QN01 128 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 WDR64B1ANS9 1081 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 M0R2N6 131 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 DLL1O00548 723 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 SLC37A4O43826 429 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 HBP1O60381 514 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 JAK2O60674 1132 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 CSPG5O95196 566 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 TMEM266Q2M3C6 531 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 FAM26DQ5JW98 314 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 FBXO47Q5MNV8 452 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 TSHZ1Q6ZSZ6 1077 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 KRT25Q7Z3Z0 450 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 SMAP1Q8IYB5 467 aaPredicted RBP10.94□□□□□ -0.66
USP54-207ENST00000451492 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 APBB2Q92870 758 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 TNPO1Q92973 898 aaKnown RBP10.94□□□□□ -0.66
USP54-207ENST00000451492 ZNF668Q96K58 619 aaPredicted RBP10.94□□□□□ -0.66
USP54-207ENST00000451492 YME1L1Q96TA2 773 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 C22orf23Q9BZE7 217 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 DISC1Q9NRI5 854 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 DDX25Q9UHL0 483 aaKnown RBP10.94□□□□□ -0.66
USP54-207ENST00000451492 PCDHA2Q9Y5H9 948 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 PCDHA10Q9Y5I2 948 aa10.94□□□□□ -0.66
USP54-207ENST00000451492 SPTBN5Q9NRC6 3674 aaKnown RBP10.94□□□□□ -0.66
USP54-207ENST00000451492 TCF20Q9UGU0 1960 aaKnown RBP10.94□□□□□ -0.66
USP54-207ENST00000451492 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
USP54-207ENST00000451492 COL1A2P08123 1366 aa10.93□□□□□ -0.66
USP54-207ENST00000451492 SMIM35A0A1B0GVV1 85 aa10.93□□□□□ -0.66
USP54-207ENST00000451492 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
USP54-207ENST00000451492 CCNT1O60563 726 aaKnown RBP10.93□□□□□ -0.66
USP54-207ENST00000451492 VTNP04004 478 aa10.93□□□□□ -0.66
USP54-207ENST00000451492 SLC26A2P50443 739 aa10.93□□□□□ -0.66
USP54-207ENST00000451492 USP11P51784 963 aa10.93□□□□□ -0.66
USP54-207ENST00000451492 CLCN3P51790 818 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms