RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 TMEM39BQ9GZU3 492 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 KAT14Q9H8E8 782 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 MTMR4Q9NYA4 1195 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 TPCN1Q9ULQ1 816 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 PCDHAC2Q9Y5I4 1007 aa8.25□□□□□ -1.09
R3HDM1-210ENST00000443537 OTOFQ9HC10 1997 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 IGKV6D-41A0A0C4DH26 115 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 PRDM1O75626 825 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 GSTP1P09211 210 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 CPA1P15085 419 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 BMP6P22004 513 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 PDIA3P30101 505 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 CAP2P40123 477 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 RPS26P62854 115 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 FKBP1BP68106 108 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 ME3Q16798 604 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 DUOXA2Q1HG44 320 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 FOXD4L6Q3SYB3 417 aaPredicted RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 ASPRV1Q53RT3 343 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 GPATCH4Q5T3I0 446 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 MAP1SQ66K74 1059 aaPredicted RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 FOXD4L3Q6VB84 417 aaPredicted RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 AGMOQ6ZNB7 445 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 KRT26Q7Z3Y9 468 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 LDHDQ86WU2 507 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 TEX2Q8IWB9 1127 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 PHC3Q8NDX5 983 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 STK35Q8TDR2 534 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 WASF1Q92558 559 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 MKL1Q969V6 931 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 DYNLL2Q96FJ2 89 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 TGIF2Q9GZN2 237 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 DNAJC18Q9H819 358 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 KCNK4Q9NYG8 393 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 STX8Q9UNK0 236 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 CYP8B1Q9UNU6 501 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 SMC3Q9UQE7 1217 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 PTPRFP10586 1907 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 STK36Q9NRP7 1315 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 PHIPQ8WWQ0 1821 aa8.24□□□□□ -1.09
R3HDM1-210ENST00000443537 SHTN1A0MZ66 631 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 GOLGA8AA7E2F4 631 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 DLL1O00548 723 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 ELNP15502 786 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 IREB2P48200 963 aaKnown RBP8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 NUCB2P80303 420 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 ICA1Q05084 483 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 FAM160A1Q05DH4 1040 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 APOBRQ0VD83 1088 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 TROAPQ12815 778 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 TRAF1Q13077 416 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 FAM47AQ5JRC9 791 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 SNAP47Q5SQN1 464 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 HP1BP3Q5SSJ5 553 aaPredicted RBP8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 NOL9Q5SY16 702 aaKnown RBP8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 ZFPM1Q8IX07 1006 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 FANCBQ8NB91 859 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 SLC44A5Q8NCS7 719 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 GMCL1P1Q8NEA9 526 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 GRIN3AQ8TCU5 1115 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 LPAR1Q92633 364 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 CEP95Q96GE4 821 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 TCEANC2Q96MN5 208 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 MIR1-1HGQ9H1L0 117 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 AS3MTQ9HBK9 375 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 IL17RBQ9NRM6 502 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 ZNF112Q9UJU3 913 aa8.23□□□□□ -1.09
R3HDM1-210ENST00000443537 hCG_1984214I3L0E3 225 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 MPHOSPH10O00566 681 aaKnown RBP8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 ADAM11O75078 769 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 PARP1P09874 1014 aaKnown RBP8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 AKR1B1P15121 316 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 IFNAR1P17181 557 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 XBP1P17861 261 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 TFE3P19532 575 aaPredicted RBP8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 USP14P54578 494 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 AKAP17AQ02040 695 aaKnown RBP8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 SCRN1Q12765 414 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 SLC4A8Q2Y0W8 1093 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 CHST3Q7LGC8 479 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 MICU3Q86XE3 530 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 SCYL3Q8IZE3 742 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 ZNF713Q8N859 430 aaPredicted RBP8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 UBASH3BQ8TF42 649 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 TMEM47Q9BQJ4 181 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 RNF26Q9BY78 433 aaPredicted RBP8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 LRRC2Q9BYS8 371 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 PICK1Q9NRD5 415 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 PNMA2Q9UL42 364 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 ZBTB21Q9ULJ3 1066 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 NAP1L2Q9ULW6 460 aaPredicted RBP8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 ATP6V1DQ9Y5K8 247 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 TACC3Q9Y6A5 838 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 MYH15Q9Y2K3 1946 aa8.22□□□□□ -1.09
R3HDM1-210ENST00000443537 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.1
R3HDM1-210ENST00000443537 ECEL1O95672 775 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms