RNA–Protein interactions for RNA: ENST00000398977.2

MSANTD3-204, Transcript of Myb/SANT DNA binding domain containing 3, human

TSL 3

Gene MSANTD3, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSANTD3-204	ENST00000398977	ADD1	P35611	737 aa	Known RBP	28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	BMPR1A	P36894	532 aa		28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	TMEM62	Q0P6H9	643 aa		28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	JAKMIP3	Q5VZ66	844 aa		28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CLP1	Q92989	425 aa	Known RBP	28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ZNF689	Q96CS4	500 aa	Predicted RBP	28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	C11orf84	Q9BUA3	381 aa	Predicted RBP	28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	FTHL17	Q9BXU8	183 aa		28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	EPHX3	Q9H6B9	360 aa		28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	IGSF9B	Q9UPX0	1349 aa		28.57	■■■□□ 2.16
MSANTD3-204	ENST00000398977	SMIM35	A0A1B0GVV1	85 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ESYT2	A0FGR8	921 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	FAM86B1	E9PN63	330 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	DDX39A	O00148	427 aa	Known RBP	28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	FAM86B2	P0C5J1	330 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	APOBR	Q0VD83	1088 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	PLA2G4D	Q86XP0	818 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	NEK9	Q8TD19	979 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CRYGN	Q8WXF5	182 aa		28.56	■■■□□ 2.16
MSANTD3-204	ENST00000398977	LOXHD1	Q8IVV2	1947 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	NID2	Q14112	1375 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	KDM3A	Q9Y4C1	1321 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	IGLV3-22	A0A075B6J6	115 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	BACH1	O14867	736 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	DGKI	O75912	1065 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	BTG3	Q14201	252 aa	Predicted RBP	28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	COL19A1	Q14993	1142 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	FAM160B1	Q5W0V3	765 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	MTHFD1L	Q6UB35	978 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ABHD15	Q6UXT9	468 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977		Q6ZUG5	572 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	PABPC5	Q96DU9	382 aa	Known RBP	28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	JAKMIP1	Q96N16	626 aa	Known RBP	28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CELF4	Q9BZC1	486 aa	Known RBP	28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	LMAN2L	Q9H0V9	348 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CD320	Q9NPF0	282 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	PADI3	Q9ULW8	664 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ATG2A	Q2TAZ0	1938 aa		28.55	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CYP3A4	P08684	503 aa		28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	PAK2	Q13177	524 aa		28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	PTCRA	Q6ISU1	281 aa	Predicted RBP	28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	RTN4RL1	Q86UN2	441 aa	Predicted RBP	28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CCDC60	Q8IWA6	550 aa	Predicted RBP	28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	FAM178B	Q8IXR5	827 aa		28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	NME8	Q8N427	588 aa		28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ATP8B4	Q8TF62	1192 aa		28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	BRF1	Q92994	677 aa		28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ZMYND12	Q9H0C1	365 aa		28.54	■■■□□ 2.16
MSANTD3-204	ENST00000398977	DHX15	O43143	795 aa	Known RBP	28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	HBP1	O60381	514 aa		28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	IL9	P15248	144 aa		28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	KRT76	Q01546	638 aa		28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	PUS10	Q3MIT2	529 aa	Known RBP	28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	NPAS4	Q8IUM7	802 aa		28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CRIPAK	Q8N1N5	446 aa		28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	CCDC12	Q8WUD4	166 aa	Predicted RBP	28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	KHSRP	Q92945	711 aa	Known RBP eCLIP	28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	SNX14	Q9Y5W7	946 aa		28.53	■■■□□ 2.16
MSANTD3-204	ENST00000398977	COL1A2	P08123	1366 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	GRXCR2	A6NFK2	248 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977		H3BQ06	376 aa	Predicted RBP	28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	IPO5	O00410	1097 aa	Known RBP	28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ADAMTS3	O15072	1205 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	GRM6	O15303	877 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	HSPA4	P34932	840 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	MCTP2	Q6DN12	878 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	BLOC1S2	Q6QNY1	142 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	REXO1	Q8N1G1	1221 aa	Known RBP	28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	C6orf50	Q9HD87	102 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	ZNF302	Q9NR11	478 aa		28.52	■■■□□ 2.16
MSANTD3-204	ENST00000398977	KLRC1	P26715	233 aa		28.51	■■■□□ 2.15
MSANTD3-204	ENST00000398977	SET	Q01105	290 aa	Predicted RBP	28.51	■■■□□ 2.15
MSANTD3-204	ENST00000398977	PKN1	Q16512	942 aa		28.51	■■■□□ 2.15
MSANTD3-204	ENST00000398977	MIS18BP1	Q6P0N0	1132 aa		28.51	■■■□□ 2.15
MSANTD3-204	ENST00000398977	PDXDC2P	Q6P474	469 aa		28.51	■■■□□ 2.15
MSANTD3-204	ENST00000398977	CMTR2	Q8IYT2	770 aa	Known RBP	28.51	■■■□□ 2.15
MSANTD3-204	ENST00000398977	PLVAP	Q9BX97	442 aa		28.51	■■■□□ 2.15
MSANTD3-204	ENST00000398977	PRPF3	O43395	683 aa	Known RBP	28.5	■■■□□ 2.15
MSANTD3-204	ENST00000398977	EP400NL	Q6ZTU2	488 aa		28.5	■■■□□ 2.15
MSANTD3-204	ENST00000398977	FBXL16	Q8N461	479 aa		28.5	■■■□□ 2.15
MSANTD3-204	ENST00000398977	ZNF577	Q9BSK1	485 aa		28.5	■■■□□ 2.15
MSANTD3-204	ENST00000398977	TMX1	Q9H3N1	280 aa		28.5	■■■□□ 2.15
MSANTD3-204	ENST00000398977	MRPL42	Q9Y6G3	142 aa	Known RBP	28.5	■■■□□ 2.15
MSANTD3-204	ENST00000398977	NCK2	O43639	380 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	STAG3L1	P0CL83	205 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	ZNF484	Q5JVG2	852 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	SWSAP1	Q6NVH7	229 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	GJD3	Q8N144	294 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	UIMC1	Q96RL1	719 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	LRFN3	Q9BTN0	628 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	AGXT2	Q9BYV1	514 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	TBC1D22B	Q9NU19	505 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	CLDND1	Q9NY35	253 aa		28.49	■■■□□ 2.15
MSANTD3-204	ENST00000398977	KIAA1671	Q9BY89	1806 aa		28.48	■■■□□ 2.15
MSANTD3-204	ENST00000398977	ZBTB42	B2RXF5	422 aa		28.48	■■■□□ 2.15
MSANTD3-204	ENST00000398977	MMP1	P03956	469 aa		28.48	■■■□□ 2.15
MSANTD3-204	ENST00000398977	RPS6KB1	P23443	525 aa		28.48	■■■□□ 2.15
MSANTD3-204	ENST00000398977	GNA11	P29992	359 aa		28.48	■■■□□ 2.15
MSANTD3-204	ENST00000398977	TMEM266	Q2M3C6	531 aa		28.48	■■■□□ 2.15
MSANTD3-204	ENST00000398977	TMEM31	Q5JXX7	168 aa		28.48	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms