RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ITGB3BPQ13352 177 aaPredicted RBP13.77□□□□□ -0.21
TFF3-202ENST00000398431 CLUL1Q15846 466 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 IER5Q5VY09 327 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 ADGRD2Q7Z7M1 963 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 CMTR2Q8IYT2 770 aaKnown RBP13.77□□□□□ -0.21
TFF3-202ENST00000398431 PGBD1Q96JS3 809 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 CELF4Q9BZC1 486 aaKnown RBP13.77□□□□□ -0.21
TFF3-202ENST00000398431 IGFLR1Q9H665 355 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 TRPV2Q9Y5S1 764 aa13.77□□□□□ -0.21
TFF3-202ENST00000398431 CNTNAP5Q8WYK1 1306 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 IGSF9BQ9UPX0 1349 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 KDM3AQ9Y4C1 1321 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 MEIS1O00470 390 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 GATMP50440 423 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 EXOSC10Q01780 885 aaKnown RBP13.76□□□□□ -0.21
TFF3-202ENST00000398431 MTHFD1LQ6UB35 978 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 HEATR3Q7Z4Q2 680 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 NPAS4Q8IUM7 802 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 KLHL23Q8NBE8 558 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 MSLNLQ96KJ4 702 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 FTHL17Q9BXU8 183 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 CDHR5Q9HBB8 845 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
TFF3-202ENST00000398431 RIC8AQ9NPQ8 531 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 CLEC1BQ9P126 229 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 FAM50BQ9Y247 325 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
TFF3-202ENST00000398431 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 MGEA5O60502 916 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 CSPG5O95196 566 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 CCNE2O96020 404 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 RPLP2P05387 115 aaKnown RBP13.75□□□□□ -0.21
TFF3-202ENST00000398431 ATP4AP20648 1035 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 KLRC1P26715 233 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 CEP55Q53EZ4 464 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 NAALADL2Q58DX5 795 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 APOA5Q6Q788 366 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 ABHD15Q6UXT9 468 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 NME8Q8N427 588 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 AZI2Q9H6S1 392 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 FAM217BQ9NTX9 383 aaPredicted RBP13.75□□□□□ -0.21
TFF3-202ENST00000398431 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
TFF3-202ENST00000398431 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
TFF3-202ENST00000398431 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 DHX15O43143 795 aaKnown RBP13.74□□□□□ -0.21
TFF3-202ENST00000398431 EYA4O95677 639 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 FOSP01100 380 aaPredicted RBP13.74□□□□□ -0.21
TFF3-202ENST00000398431 SCG2P13521 617 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
TFF3-202ENST00000398431 KRT76Q01546 638 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 SMAD4Q13485 552 aaKnown RBP13.74□□□□□ -0.21
TFF3-202ENST00000398431 TMEM266Q2M3C6 531 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
TFF3-202ENST00000398431 RNF135Q8IUD6 432 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 KIAA0319LQ8IZA0 1049 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 POF1BQ8WVV4 589 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 TMEM40Q8WWA1 233 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
TFF3-202ENST00000398431 UIMC1Q96RL1 719 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 ANO3Q9BYT9 981 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 ERVK-5Q9HDB9 667 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 CD207Q9UJ71 328 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 EVPLQ92817 2033 aa13.74□□□□□ -0.21
TFF3-202ENST00000398431 SMCO2A6NFE2 343 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 ZBTB42B2RXF5 422 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 STXBP3O00186 592 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 STAG3L1P0CL83 205 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 SREBF1P36956 1147 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 NAPAP54920 295 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 PAK2Q13177 524 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
TFF3-202ENST00000398431 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
TFF3-202ENST00000398431 TEX2Q8IWB9 1127 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 RASEFQ8IZ41 740 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 EFHBQ8N7U6 833 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 FBXL18Q96ME1 805 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 TCEANC2Q96MN5 208 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 SDF4Q9BRK5 362 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
TFF3-202ENST00000398431 MUTYHQ9UIF7 546 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 NOC2LQ9Y3T9 749 aaKnown RBP13.73□□□□□ -0.21
TFF3-202ENST00000398431 PCDHGC5Q9Y5F6 944 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 C5orf42Q9H799 3197 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 TECTAO75443 2155 aa13.73□□□□□ -0.21
TFF3-202ENST00000398431 FNDC1Q4ZHG4 1894 aaPredicted RBP13.72□□□□□ -0.21
TFF3-202ENST00000398431 PLXNA4Q9HCM2 1894 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 FAM86B1E9PN63 330 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 M0QZ92 97 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 HBP1O60381 514 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 GLP2RO95838 553 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 FAM86B2P0C5J1 330 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 CDC27P30260 824 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms