RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SIX2Q9NPC8 291 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 NYAP2Q9P242 653 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 A6NNZ2 444 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 ANKRD65E5RJM6 399 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 JAM2P57087 298 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 ENOX2Q16206 610 aaKnown RBP13.97□□□□□ -0.17
CTPS1-202ENST00000372621 TUBB8Q3ZCM7 444 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 PRR16Q569H4 304 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 DNM3Q9UQ16 869 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 ASTN1O14525 1302 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 KIF4AO95239 1232 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 ECHS1P30084 290 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 CCT5P48643 541 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 EXOC3L4Q17RC7 722 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 ACTRT1Q8TDG2 376 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 ZHX3Q9H4I2 956 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 FAM86B1E9PN63 330 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 MEIS1O00470 390 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 FAM86B2P0C5J1 330 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 ANXA13P27216 316 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 MMP14P50281 582 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.171e-7■■□□□ 13.8
CTPS1-202ENST00000372621 RPS6KA1Q15418 735 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 CFAP58Q5T655 872 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 EFCAB13Q8IY85 973 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 BCAS4Q8TDM0 211 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.96□□□□□ -0.17
CTPS1-202ENST00000372621 PBKQ96KB5 322 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 USP21Q9UK80 565 aa13.96□□□□□ -0.17
CTPS1-202ENST00000372621 AJAP1Q9UKB5 411 aaPredicted RBP13.96□□□□□ -0.17
CTPS1-202ENST00000372621 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.18
CTPS1-202ENST00000372621 SREBF1P36956 1147 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 HSPA9P38646 679 aaKnown RBP13.96□□□□□ -0.18
CTPS1-202ENST00000372621 TNNC1P63316 161 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 SLFN13Q68D06 897 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 MCTP2Q6DN12 878 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 KDM7AQ6ZMT4 941 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 SH2D3CQ8N5H7 860 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 ERMNQ8TAM6 284 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 TEKT1Q969V4 418 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 VAV3Q9UKW4 847 aa13.96□□□□□ -0.18
CTPS1-202ENST00000372621 KCNK3O14649 394 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 SLC16A3O15427 465 aaKnown RBP13.95□□□□□ -0.18
CTPS1-202ENST00000372621 CALUO43852 315 aaPredicted RBP13.95□□□□□ -0.18
CTPS1-202ENST00000372621 CPP00450 1065 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 RNASE9P60153 205 aaKnown RBP13.95□□□□□ -0.18
CTPS1-202ENST00000372621 ALKBH5Q6P6C2 394 aaKnown RBP13.95□□□□□ -0.18
CTPS1-202ENST00000372621 SLFN11Q7Z7L1 901 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 SLC35C1Q96A29 364 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 BORCS6Q96GS4 357 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 SPAG5Q96R06 1193 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 ISCUQ9H1K1 167 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
CTPS1-202ENST00000372621 CIITAP33076 1130 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 GUCY2FP51841 1108 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 TPCN2Q8NHX9 752 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 OLIG1Q8TAK6 271 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 BBXQ8WY36 941 aaPredicted RBP13.95□□□□□ -0.18
CTPS1-202ENST00000372621 PPM1EQ8WY54 764 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 FAM20AQ96MK3 541 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
CTPS1-202ENST00000372621 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 EP400Q96L91 3159 aa13.95□□□□□ -0.18
CTPS1-202ENST00000372621 RSPH10B2B2RC85 870 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 NR3C1P04150 777 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 RSPH10BP0C881 870 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 ERVK-9P63128 1117 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 TTC19Q6DKK2 380 aaPredicted RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 PACS2Q86VP3 889 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 TAF4BQ92750 862 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 AMNQ9BXJ7 453 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 TAF1DQ9H5J8 278 aaPredicted RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 BCAS3Q9H6U6 928 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 STXBP5LQ9Y2K9 1186 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 GTPBP10A4D1E9 387 aaKnown RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 EBAG9O00559 213 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 MSH4O15457 936 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 CASP4P49662 377 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 IFI16Q16666 785 aaKnown RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 KCTD16Q68DU8 428 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 TATDN1Q6P1N9 297 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 DNAAF5Q86Y56 855 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 CALR3Q96L12 384 aaKnown RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 FAM107BQ9H098 131 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 METTL14Q9HCE5 456 aaKnown RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 ZNF646O15015 1829 aaPredicted RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 DDTLA6NHG4 134 aaPredicted RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 FAM196BA6NMK8 535 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 OPLAHO14841 1288 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 ZEB2O60315 1214 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 CRKP46108 304 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 DOK7Q18PE1 504 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 SKIDA1Q1XH10 827 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 KLHL7Q8IXQ5 586 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 ZDHHC15Q96MV8 337 aa13.94□□□□□ -0.18
CTPS1-202ENST00000372621 POLR3CQ9BUI4 534 aaPredicted RBP13.94□□□□□ -0.18
CTPS1-202ENST00000372621 RUSC1Q9BVN2 902 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms