RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 HPXP02790 462 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 IVLP07476 585 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 GNAI1P63096 354 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 GRB10Q13322 594 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 NR0B2Q15466 257 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 ELF2Q15723 593 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 TMCO3Q6UWJ1 677 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 GOLGA5Q8TBA6 731 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 RTF1Q92541 710 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 PHACTR3Q96KR7 559 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 FCRL3Q96P31 734 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 MCMBPQ9BTE3 642 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 DSCC1Q9BVC3 393 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 TRIM5Q9C035 493 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 NOL6Q9H6R4 1146 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 DDX19AQ9NUU7 478 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 CGGBP1Q9UFW8 167 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 SF3B6Q9Y3B4 125 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 PHLPP1O60346 1717 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 COL16A1Q07092 1604 aaPredicted RBP8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 COL14A1Q05707 1796 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 OVOS2A0A0G2JMS6 1433 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 MEIS1O00470 390 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 CCP110O43303 1012 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 HMOX1P09601 288 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 PNMA6AP0CW24 399 aaPredicted RBP8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 IRAK1P51617 712 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 SULT6B1Q6IMI4 303 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 SARM1Q6SZW1 724 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 KRBA2Q6ZNG9 492 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 CCDC191Q8NCU4 936 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 PDZD8Q8NEN9 1154 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 EPN3Q9H201 632 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 ATP10DQ9P241 1426 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 CLIP2Q9UDT6 1046 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 SMC3Q9UQE7 1217 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 HDAC5Q9UQL6 1122 aa8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-204ENST00000349311 NOTOA8MTQ0 251 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 MYO1CO00159 1063 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 FIBPO43427 364 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 NRDCO43847 1150 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 VAMP4O75379 141 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 APPP05067 770 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 ZNF853P0CG23 659 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 NAT2P11245 290 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 ENDOUP21128 410 aaKnown RBP8.83□□□□□ -1
UBE2D3-204ENST00000349311 GSDMDP57764 484 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 LRMPQ12912 555 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 TTC31Q49AM3 519 aaPredicted RBP8.83□□□□□ -1
UBE2D3-204ENST00000349311 TMEM52Q8NDY8 209 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 BVESQ8NE79 360 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 FBXO18Q8NFZ0 1043 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 MRFAP1L1Q96HT8 127 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 CCDC113Q9H0I3 377 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 L2HGDHQ9H9P8 463 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 ST7Q9NRC1 585 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 SIRPGQ9P1W8 387 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 PLCH1Q4KWH8 1693 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 NWD2Q9ULI1 1742 aa8.83□□□□□ -1
UBE2D3-204ENST00000349311 AOX1Q06278 1338 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 JUNBP17275 347 aaPredicted RBP8.82□□□□□ -1
UBE2D3-204ENST00000349311 TAL1P17542 331 aaPredicted RBP8.82□□□□□ -1
UBE2D3-204ENST00000349311 KCNJ6P48051 423 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 POU4F1Q01851 419 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 ZSCAN26Q16670 478 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 ZPBP2Q6X784 338 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 SYT10Q6XYQ8 523 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 CERS3Q8IU89 383 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 CCAR2Q8N163 923 aaKnown RBP8.82□□□□□ -1
UBE2D3-204ENST00000349311 ADCY4Q8NFM4 1077 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 CACTINQ8WUQ7 758 aaKnown RBP8.82□□□□□ -1
UBE2D3-204ENST00000349311 GTF3C6Q969F1 213 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 EXOC4Q96A65 974 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 ZNF669Q96BR6 464 aaPredicted RBP8.82□□□□□ -1
UBE2D3-204ENST00000349311 FCRL2Q96LA5 508 aaPredicted RBP8.82□□□□□ -1
UBE2D3-204ENST00000349311 ZSCAN31Q96LW9 406 aaPredicted RBP8.82□□□□□ -1
UBE2D3-204ENST00000349311 DRC1Q96MC2 740 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 TNMDQ9H2S6 317 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 ZNF446Q9NWS9 450 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 ERVK13-1Q9NX77 482 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 SHANK3Q9BYB0 1731 aa8.82□□□□□ -1
UBE2D3-204ENST00000349311 GOLGA6L19H0YKK7 550 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 AURKAO14965 403 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 ZRANB2O95218 330 aaKnown RBP eCLIP8.81□□□□□ -11e-7■■□□□ 13.8
UBE2D3-204ENST00000349311 MAGEA9P43362 315 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 KIR2DL1P43626 348 aaPredicted RBP8.81□□□□□ -1
UBE2D3-204ENST00000349311 KIR2DL2P43627 348 aaPredicted RBP8.81□□□□□ -1
UBE2D3-204ENST00000349311 KRT85P78386 507 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 CYP4F3Q08477 520 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 SLC10A6Q3KNW5 377 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 ANO6Q4KMQ2 910 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 SOGA3Q5TF21 947 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 RBM43Q6ZSC3 357 aaKnown RBP8.81□□□□□ -1
UBE2D3-204ENST00000349311 EEPD1Q7L9B9 569 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 CCDC91Q7Z6B0 441 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 ADAT2Q7Z6V5 191 aaKnown RBP8.81□□□□□ -1
UBE2D3-204ENST00000349311 SRLQ86TD4 932 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 TRIM59Q8IWR1 403 aa8.81□□□□□ -1
UBE2D3-204ENST00000349311 LRRC8AQ8IWT6 810 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms