RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 LRRC41Q15345 812 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 KRT71Q3SY84 523 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 ALKBH5Q6P6C2 394 aaKnown RBP19.84■□□□□ 0.77
KRCC1-201ENST00000347055 H2AFVQ71UI9 128 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 ZNF571Q7Z3V5 609 aaPredicted RBP19.84■□□□□ 0.77
KRCC1-201ENST00000347055 HVCN1Q96D96 273 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 SPAG5Q96R06 1193 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 METTL14Q9HCE5 456 aaKnown RBP19.84■□□□□ 0.77
KRCC1-201ENST00000347055 SUFUQ9UMX1 484 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 TRAF3IP3Q9Y228 551 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 NCANO14594 1321 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 COL24A1Q17RW2 1714 aa19.84■□□□□ 0.77
KRCC1-201ENST00000347055 SLC16A3O15427 465 aaKnown RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 AFPP02771 609 aaKnown RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 LDHBP07195 334 aaKnown RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 DNA2P51530 1060 aa19.83■□□□□ 0.77
KRCC1-201ENST00000347055 MAGOHP61326 146 aaKnown RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 QPCTQ16769 361 aa19.83■□□□□ 0.77
KRCC1-201ENST00000347055 MAGOHBQ96A72 148 aaKnown RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 EYA3Q99504 573 aa19.83■□□□□ 0.77
KRCC1-201ENST00000347055 TMEM109Q9BVC6 243 aa19.83■□□□□ 0.77
KRCC1-201ENST00000347055 STMN4Q9H169 189 aaPredicted RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 NEUROG2Q9H2A3 272 aa19.83■□□□□ 0.77
KRCC1-201ENST00000347055 CNOT8Q9UFF9 292 aaKnown RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 TPX2Q9ULW0 747 aaKnown RBP19.83■□□□□ 0.77
KRCC1-201ENST00000347055 STK24Q9Y6E0 443 aa19.83■□□□□ 0.77
KRCC1-201ENST00000347055 LOC102724428A0A0B4J2F2 783 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 CCT8L1PA6NM43 557 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 CCDC169A6NNP5 214 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 PPIP5K2O43314 1243 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 TRIM37O94972 964 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 UCHL3P15374 230 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 FERP16591 822 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 SIK1P57059 783 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 PTENP60484 403 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 ADAM9Q13443 819 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 DHX34Q14147 1143 aaKnown RBP19.83■□□□□ 0.76
KRCC1-201ENST00000347055 KCNK18Q7Z418 384 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 PIGSQ96S52 555 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 FMO2Q99518 471 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 NYXQ9GZU5 481 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 GLT8D2Q9H1C3 349 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 EMILIN3Q9NT22 766 aa19.83■□□□□ 0.76
KRCC1-201ENST00000347055 CNOT7Q9UIV1 285 aaKnown RBP19.83■□□□□ 0.76
KRCC1-201ENST00000347055 MYH14Q7Z406 1995 aaKnown RBP19.82■□□□□ 0.76
KRCC1-201ENST00000347055 A0A1B0GUA9 196 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 POTEMA6NI47 508 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 DAPK3O43293 454 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 GOLGA8HP0CJ92 632 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 HSPA6P17066 643 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 SLC8A3P57103 927 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 DHX9Q08211 1270 aaKnown RBP19.82■□□□□ 0.76
KRCC1-201ENST00000347055 MSL1Q68DK7 614 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 NT5DC3Q86UY8 548 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 OR2W6PQ8NHA6 318 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 SH3RF3Q8TEJ3 882 aaPredicted RBP19.82■□□□□ 0.76
KRCC1-201ENST00000347055 SCFD1Q8WVM8 642 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 CELF1Q92879 486 aaKnown RBP19.82■□□□□ 0.76
KRCC1-201ENST00000347055 HOOK2Q96ED9 719 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 DDX47Q9H0S4 455 aaKnown RBP19.82■□□□□ 0.76
KRCC1-201ENST00000347055 HAUS2Q9NVX0 235 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 HDAC9Q9UKV0 1011 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 SLC12A4Q9UP95 1085 aa19.82■□□□□ 0.76
KRCC1-201ENST00000347055 GOLGA6L10A0A0M3HER8 536 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 TDP2O95551 362 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 TMOD1P28289 359 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 MMP13P45452 471 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 JAM2P57087 298 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 LMNB2Q03252 620 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 EXOC3L4Q17RC7 722 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 BTNL9Q6UXG8 535 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 GLIS3Q8NEA6 775 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 N4BP2L2Q92802 583 aaPredicted RBP19.81■□□□□ 0.76
KRCC1-201ENST00000347055 ZNF317Q96PQ6 595 aaPredicted RBP19.81■□□□□ 0.76
KRCC1-201ENST00000347055 NSRP1Q9H0G5 558 aaKnown RBP19.81■□□□□ 0.76
KRCC1-201ENST00000347055 CARD9Q9H257 536 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 BTG4Q9NY30 223 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 BCCIPQ9P287 314 aaKnown RBP eCLIP19.81■□□□□ 0.76
KRCC1-201ENST00000347055 ARMCX3Q9UH62 379 aaPredicted RBP19.81■□□□□ 0.76
KRCC1-201ENST00000347055 AMFRQ9UKV5 643 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 CDK5RAP2Q96SN8 1893 aa19.81■□□□□ 0.76
KRCC1-201ENST00000347055 CALUO43852 315 aaPredicted RBP19.8■□□□□ 0.76
KRCC1-201ENST00000347055 PLCG2P16885 1265 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 CLK2P49760 499 aaKnown RBP19.8■□□□□ 0.76
KRCC1-201ENST00000347055 C3orf67Q6ZVT6 689 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 PIGWQ7Z7B1 504 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 FAM228AQ86W67 206 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 MIEF2Q96C03 454 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 NUDT12Q9BQG2 462 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 TMEM260Q9NX78 707 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 PARP2Q9UGN5 583 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 DDX25Q9UHL0 483 aaKnown RBP19.8■□□□□ 0.76
KRCC1-201ENST00000347055 EDIL3O43854 480 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 ZPR1O75312 459 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 AGTP01019 485 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 KLRK1P26718 216 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 CDK8P49336 464 aa19.8■□□□□ 0.76
KRCC1-201ENST00000347055 RNASE9P60153 205 aaKnown RBP19.8■□□□□ 0.76
KRCC1-201ENST00000347055 TLDC1Q6P9B6 456 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms