RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CCDC197Q8NCU1 140 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 FBF1Q8TES7 1133 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 SREK1Q8WXA9 508 aaKnown RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 SYN2Q92777 582 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 RNF25Q96BH1 459 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 HIC2Q96JB3 615 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ZMAT2Q96NC0 199 aaKnown RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 SH3GL1Q99961 368 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 TAF1DQ9H5J8 278 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-201ENST00000316433 ATP8A2Q9NTI2 1148 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 MYH8P13535 1937 aa7.23□□□□□ -1.25
ZNF540-201ENST00000316433 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 E7ENQ6 273 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 PDE8AO60658 829 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 HIP1RO75146 1068 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 PDE6AP16499 860 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 GNAZP19086 355 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 HPDP32754 393 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 MCAMP43121 646 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 SERPINB4P48594 390 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 GUCY2FP51841 1108 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 MTTPP55157 894 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 LACTBP83111 547 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 DMPKQ09013 629 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 LSAMPQ13449 338 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 SAFBQ15424 915 aaKnown RBP eCLIP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 NPY5RQ15761 445 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 LONRF3Q496Y0 759 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CACNA2D4Q7Z3S7 1137 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 C14orf80Q86SX3 495 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 IQCKQ8N0W5 287 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 ANKS4BQ8N8V4 417 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 TTLL11Q8NHH1 800 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CAGE1Q8TC20 777 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 DDX12PQ92771 950 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CAPZA3Q96KX2 299 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 AK8Q96MA6 479 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 GBP5Q96PP8 586 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 SMC6Q96SB8 1091 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 TIPINQ9BVW5 301 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CCSER1Q9C0I3 900 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CCDC87Q9NVE4 849 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CTNNAL1Q9UBT7 734 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 HESX1Q9UBX0 185 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF148Q9UQR1 794 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 A0A0J9YVX5 310 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 A8MUI8 341 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CETN3O15182 167 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 WFS1O76024 890 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CNPY1Q3B7I2 92 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 ZNF658Q5TYW1 1059 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 TBC1D9BQ66K14 1250 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 C15orf52Q6ZUT6 534 aaKnown RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 TRIM22Q8IYM9 498 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 ABTB1Q969K4 478 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 MAML3Q96JK9 1138 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 HAPLN3Q96S86 360 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 SRPK1Q96SB4 655 aaKnown RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CDCA7Q9BWT1 371 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 PUS7LQ9H0K6 701 aaKnown RBP7.22□□□□□ -1.25
ZNF540-201ENST00000316433 IRF2BPLQ9H1B7 796 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 EXOC1Q9NV70 894 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 SLC12A6Q9UHW9 1150 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CAPN11Q9UMQ6 739 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 TIMM22Q9Y584 194 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 NRXN2Q9P2S2 1712 aa7.22□□□□□ -1.25
ZNF540-201ENST00000316433 CPLX1O14810 134 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 ANXA1P04083 346 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 NFKBIAP25963 317 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 CDC27P30260 824 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 GPSM2P81274 684 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 STK3Q13188 491 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 PARP10Q53GL7 1025 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 NLRP10Q86W26 655 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 LENG1Q96BZ8 264 aaPredicted RBP7.21□□□□□ -1.25
ZNF540-201ENST00000316433 CCDC43Q96MW1 224 aaKnown RBP7.21□□□□□ -1.25
ZNF540-201ENST00000316433 ERGIC2Q96RQ1 377 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 SIL1Q9H173 461 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 NRDE2Q9H7Z3 1164 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 EPB41L4AQ9HCS5 686 aaPredicted RBP7.21□□□□□ -1.25
ZNF540-201ENST00000316433 HSFX1Q9UBD0 423 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 TSKSQ9UJT2 592 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 STK24Q9Y6E0 443 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 COMMD3-BMI1R4GMX3 469 aa7.21□□□□□ -1.25
ZNF540-201ENST00000316433 ENC1O14682 589 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 BACH1O14867 736 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 SRGAP2O75044 1071 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 PAEPP09466 180 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 DRD4P21917 467 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 GBP1P32455 592 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ZC3H6P61129 1189 aaKnown RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 GUCY2DQ02846 1103 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 C2orf54Q08AI8 447 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 INAQ16352 499 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 ZNF362Q5T0B9 420 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-201ENST00000316433 TMCO4Q5TGY1 634 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 RASIP1Q5U651 963 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 GRAMD4Q6IC98 578 aa7.21□□□□□ -1.26
ZNF540-201ENST00000316433 SLC2A7Q6PXP3 512 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 399 ms