RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 SART1O43290 800 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 KIAA0754O94854 1291 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 RSPH10BP0C881 870 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 XRCC5P13010 732 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 CASP4P49662 377 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 KNOP1Q1ED39 458 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 SHROOM1Q2M3G4 852 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 NOC2LQ9Y3T9 749 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 CAPN7Q9Y6W3 813 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 FRMD3A2A2Y4 597 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 GOLGA6L10A6NI86 522 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 FLT3P36888 993 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 MDH1P40925 334 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 SCNN1DP51172 638 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 UAP1Q16222 522 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 GPATCH4Q5T3I0 446 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 PPP4R3CPQ6ZMV5 832 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 MMS22LQ6ZRQ5 1243 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 FAM196AQ6ZSG2 479 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 OTUD6BQ8N6M0 293 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 ZNF473Q8WTR7 871 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 SCFD2Q8WU76 684 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 PPANQ9NQ55 473 aaKnown RBP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 BCCIPQ9P287 314 aaKnown RBP eCLIP21.15■□□□□ 0.98
SCARB1-201ENST00000261693 FOCADQ5VW36 1801 aa21.15■□□□□ 0.98
SCARB1-201ENST00000261693 BTAF1O14981 1849 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 HMGB1P1B2RPK0 211 aaPredicted RBP21.14■□□□□ 0.98
SCARB1-201ENST00000261693 CLIC2O15247 247 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 HDLBPQ00341 1268 aaKnown RBP21.14■□□□□ 0.98
SCARB1-201ENST00000261693 KCNA1Q09470 495 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 TPCN2Q8NHX9 752 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 PBKQ96KB5 322 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 CCT8L2Q96SF2 557 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 TMBIM4Q9HC24 238 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 USP40Q9NVE5 1235 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 AMACRQ9UHK6 382 aa21.14■□□□□ 0.98
SCARB1-201ENST00000261693 E7EVH7 732 aa21.14■□□□□ 0.97
SCARB1-201ENST00000261693 KRIT1O00522 736 aa21.14■□□□□ 0.97
SCARB1-201ENST00000261693 CTNNA1P35221 906 aaKnown RBP21.14■□□□□ 0.97
SCARB1-201ENST00000261693 CYP4A11Q02928 519 aa21.14■□□□□ 0.97
SCARB1-201ENST00000261693 SF3B2Q13435 895 aaKnown RBP21.14■□□□□ 0.97
SCARB1-201ENST00000261693 PEX26Q7Z412 305 aa21.14■□□□□ 0.97
SCARB1-201ENST00000261693 FRMD5Q7Z6J6 570 aa21.14■□□□□ 0.97
SCARB1-201ENST00000261693 IKZF4Q9H2S9 585 aa21.14■□□□□ 0.97
SCARB1-201ENST00000261693 FAM196BA6NMK8 535 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 BTNL10A8MVZ5 291 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 PGRMC1O00264 195 aaKnown RBP21.13■□□□□ 0.97
SCARB1-201ENST00000261693 C10orf76Q5T2E6 689 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 NLRP14Q86W24 1093 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 ACTRT1Q8TDG2 376 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 P2RX7Q99572 595 aaKnown RBP21.13■□□□□ 0.97
SCARB1-201ENST00000261693 PLCB1Q9NQ66 1216 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 GCOM1H8Y6P7 765 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-201ENST00000261693 MEFVO15553 781 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-201ENST00000261693 MYZAPP0CAP1 466 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 DAAM2Q86T65 1068 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 UBLCP1Q8WVY7 318 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-201ENST00000261693 DNM3Q9UQ16 869 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 TRAF3IP3Q9Y228 551 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 BZW2Q9Y6E2 419 aaKnown RBP21.13■□□□□ 0.97
SCARB1-201ENST00000261693 PITPNM2Q9BZ72 1349 aa21.13■□□□□ 0.97
SCARB1-201ENST00000261693 MYO1FO00160 1098 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 DAPK3O43293 454 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 FLOT1O75955 427 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 TAL1P17542 331 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-201ENST00000261693 EPHA7Q15375 998 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 MYCBPAPQ8TBZ2 947 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 IPO4Q8TEX9 1081 aaKnown RBP21.12■□□□□ 0.97
SCARB1-201ENST00000261693 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.12■□□□□ 0.973e-8■■■□□ 15.6
SCARB1-201ENST00000261693 GCNT4Q9P109 453 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 SWAP70Q9UH65 585 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 PCDHB13Q9Y5F0 798 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 KDM4FA0A1W2PPD8 638 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 SFI1A8K8P3 1242 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 CES2O00748 559 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 SPATA31C1P0DKV0 1188 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 HNRNPH1P31943 449 aaKnown RBP21.12■□□□□ 0.97
SCARB1-201ENST00000261693 SPIRE1Q08AE8 756 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 CUL1Q13616 776 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 IFI16Q16666 785 aaKnown RBP21.12■□□□□ 0.97
SCARB1-201ENST00000261693 RNF187Q5TA31 235 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-201ENST00000261693 U2AF1L4Q8WU68 220 aaKnown RBP21.12■□□□□ 0.97
SCARB1-201ENST00000261693 CELF4Q9BZC1 486 aaKnown RBP21.12■□□□□ 0.97
SCARB1-201ENST00000261693 FBXL5Q9UKA1 691 aa21.12■□□□□ 0.97
SCARB1-201ENST00000261693 H0YGN5 161 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 GFPT2O94808 682 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 NR3C1P04150 777 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 ZNF844Q08AG5 666 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 EMC10Q5UCC4 262 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 CERS5Q8N5B7 392 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 RBM17Q96I25 401 aaKnown RBP21.11■□□□□ 0.97
SCARB1-201ENST00000261693 SIX2Q9NPC8 291 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 NFS1Q9Y697 457 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 H0YHG0 523 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 GCNT3O95395 438 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 ARHGAP4P98171 946 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 KCNV1Q6PIU1 500 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 SLFN12Q8IYM2 578 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 ETNPPLQ8TBG4 499 aa21.11■□□□□ 0.97
SCARB1-201ENST00000261693 NAP1L4Q99733 375 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms