RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 TDRD3Q9H7E2 651 aaKnown RBP15.95■□□□□ 0.14
SNPH-203ENST00000614659 ENC1O14682 589 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 SREBF2Q12772 1141 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 MCUR1Q96AQ8 359 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 EDEM3Q9BZQ6 932 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L15C9J2P7 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L13C9JLJ4 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L11C9JVI0 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L18D6R9N7 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L22D6RA61 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L17D6RBQ6 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L19D6RCP7 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L20D6RJB6 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 USP17L24Q0WX57 530 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 STOX1Q6ZVD7 989 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 DCP1AQ9NPI6 582 aaPredicted RBP15.95■□□□□ 0.14
SNPH-203ENST00000614659 CAPN7Q9Y6W3 813 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 A0A087WWV3 80 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 CSF1RP07333 972 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 CCDC13Q8IYE1 715 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 RAD54LQ92698 747 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 GDAP1L1Q96MZ0 367 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 NUB1Q9Y5A7 615 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 CYP2D7A0A087X1C5 515 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 SLMAPQ14BN4 828 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
SNPH-203ENST00000614659 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 DPH5Q9H2P9 285 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 BARHL2Q9NY43 387 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 GCNT4Q9P109 453 aa15.95■□□□□ 0.14
SNPH-203ENST00000614659 ARHGEF28Q8N1W1 1705 aaKnown RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 ASB14A6NK59 587 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 KCNV1Q6PIU1 500 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 ZNF34Q8IZ26 560 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 BCAP29Q9UHQ4 241 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 MOCS3O95396 460 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 PNMA6AP0CW24 399 aaPredicted RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 SLC8A1P32418 973 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 CYP4A11Q02928 519 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 PDZD4Q76G19 769 aaPredicted RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 PALM2Q8IXS6 379 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 EFCAB13Q8IY85 973 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 PARK7Q99497 189 aaKnown RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 IFT122Q9HBG6 1241 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 C19orf81C9J6K1 198 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 CAMTA2O94983 1202 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 PIK3CAP42336 1068 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 ECE1P42892 770 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 TKFCQ3LXA3 575 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 SHC4Q6S5L8 630 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 RHOT2Q8IXI1 618 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 MICALL2Q8IY33 904 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 SH3RF3Q8TEJ3 882 aaPredicted RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 MTIF3Q9H2K0 278 aaKnown RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 ZBTB5O15062 677 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 ENTPD3O75355 529 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 MKRN3Q13064 507 aaKnown RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 GPIHBP1Q8IV16 184 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 ARHGEF2Q92974 986 aaKnown RBP15.94■□□□□ 0.14
SNPH-203ENST00000614659 UIMC1Q96RL1 719 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 TMEM47Q9BQJ4 181 aa15.94■□□□□ 0.14
SNPH-203ENST00000614659 SETSIPP0DME0 302 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 ZNF131P52739 623 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 CASP8Q14790 479 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 PPP1R21Q6ZMI0 780 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 TOGARAM2Q6ZUX3 1019 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 RNF10Q8N5U6 811 aaKnown RBP15.93■□□□□ 0.14
SNPH-203ENST00000614659 TBC1D16Q8TBP0 767 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 ANKRD36BP1Q96IX9 119 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 ZFYVE28Q9HCC9 887 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 EPB41L5Q9HCM4 733 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 CNOT7Q9UIV1 285 aaKnown RBP15.93■□□□□ 0.14
SNPH-203ENST00000614659 ITIH6Q6UXX5 1313 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 LRRC41Q15345 812 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 EP400NLQ6ZTU2 488 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 VPS52Q8N1B4 723 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 NEK9Q8TD19 979 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 POMGNT1Q8WZA1 660 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 TMEM131LA2VDJ0 1609 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 GRID2IPA4D2P6 1211 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 RGL2O15211 777 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 RNASELQ05823 741 aaKnown RBP15.93■□□□□ 0.14
SNPH-203ENST00000614659 CCDC144BQ3MJ40 725 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 PHLDB2Q86SQ0 1253 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 FAM133AQ8N9E0 248 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 BAIAP2L1Q9UHR4 511 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 FBXO2Q9UK22 296 aaPredicted RBP15.93■□□□□ 0.14
SNPH-203ENST00000614659 HMGB1P1B2RPK0 211 aaPredicted RBP15.93■□□□□ 0.14
SNPH-203ENST00000614659 MYO1FO00160 1098 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 CASQ2O14958 399 aaPredicted RBP15.93■□□□□ 0.14
SNPH-203ENST00000614659 C2orf54Q08AI8 447 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 RPUSD2Q8IZ73 545 aaKnown RBP15.93■□□□□ 0.14
SNPH-203ENST00000614659 FAM20AQ96MK3 541 aa15.93■□□□□ 0.14
SNPH-203ENST00000614659 FCER1AP12319 257 aa15.92■□□□□ 0.14
SNPH-203ENST00000614659 UBXN2AP68543 259 aa15.92■□□□□ 0.14
SNPH-203ENST00000614659 SNAPC2Q13487 334 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms