RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 CD52P31358 61 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 STXBP2Q15833 593 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 RARS2Q5T160 578 aaKnown RBP13.01□□□□□ -0.33
GGA3-206ENST00000578773 ERC1Q8IUD2 1116 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 MAML2Q8IZL2 1156 aaPredicted RBP13.01□□□□□ -0.33
GGA3-206ENST00000578773 ZDHHC14Q8IZN3 488 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 LMBR1Q8WVP7 490 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 RMDN3Q96TC7 470 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 CDCA3Q99618 268 aaPredicted RBP13.01□□□□□ -0.33
GGA3-206ENST00000578773 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 TUT1Q9H6E5 874 aaKnown RBP13.01□□□□□ -0.33
GGA3-206ENST00000578773 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 CNOT1A5YKK6 2376 aaKnown RBP13□□□□□ -0.33
GGA3-206ENST00000578773 LRRN2O75325 713 aa13□□□□□ -0.33
GGA3-206ENST00000578773 PPFIA4O75335 1185 aa13□□□□□ -0.33
GGA3-206ENST00000578773 ARHGAP4P98171 946 aa13□□□□□ -0.33
GGA3-206ENST00000578773 FBXO47Q5MNV8 452 aa13□□□□□ -0.33
GGA3-206ENST00000578773 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
GGA3-206ENST00000578773 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
GGA3-206ENST00000578773 PARD6AQ9NPB6 346 aa13□□□□□ -0.33
GGA3-206ENST00000578773 TMEM260Q9NX78 707 aa13□□□□□ -0.33
GGA3-206ENST00000578773 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 ZIC2O95409 532 aaPredicted RBP12.99□□□□□ -0.33
GGA3-206ENST00000578773 APPP05067 770 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 CFHP08603 1231 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 GLULP15104 373 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 TGM1P22735 817 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 PBX3P40426 434 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 NOVP48745 357 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 PPARAQ07869 468 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 PPM1JQ5JR12 505 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 NPAS4Q8IUM7 802 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 RASGRP4Q8TDF6 673 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
GGA3-206ENST00000578773 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 PXMP2Q9NR77 195 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 DLGAP2Q9P1A6 1054 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 FBXL21Q9UKT6 434 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 CDV3Q9UKY7 258 aaKnown RBP12.99□□□□□ -0.33
GGA3-206ENST00000578773 CA14Q9ULX7 337 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 DUSP12Q9UNI6 340 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 HCFC2Q9Y5Z7 792 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 CDY2AQ9Y6F7 541 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 EVPLQ92817 2033 aa12.99□□□□□ -0.33
GGA3-206ENST00000578773 DOCK6Q96HP0 2047 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 IGF2RP11717 2491 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 AKAP13Q12802 2813 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 TSPY2A6NKD2 308 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 B4DLN1 442 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 STK25O00506 426 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 FOXP2O15409 715 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 NR3C2P08235 984 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 MRPL12P52815 198 aaKnown RBP12.98□□□□□ -0.33
GGA3-206ENST00000578773 SPOUT1Q5T280 376 aaKnown RBP12.98□□□□□ -0.33
GGA3-206ENST00000578773 ARHGEF16Q5VV41 709 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 CLASRPQ8N2M8 674 aaKnown RBP12.98□□□□□ -0.33
GGA3-206ENST00000578773 RSAD2Q8WXG1 361 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 TMEM47Q9BQJ4 181 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 NCDNQ9UBB6 729 aa12.98□□□□□ -0.33
GGA3-206ENST00000578773 DSPP15924 2871 aaKnown RBP12.98□□□□□ -0.33
GGA3-206ENST00000578773 MGEA5O60502 916 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 EIF3JO75822 258 aaKnown RBP12.97□□□□□ -0.33
GGA3-206ENST00000578773 EOMESO95936 686 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 PDHBP11177 359 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 MYCLP12524 364 aaPredicted RBP12.97□□□□□ -0.33
GGA3-206ENST00000578773 HOXB8P17481 243 aaPredicted RBP12.97□□□□□ -0.33
GGA3-206ENST00000578773 UBE3AQ05086 875 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
GGA3-206ENST00000578773 FAM102BQ5T8I3 360 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 DNAJB3Q8WWF6 145 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 IWS1Q96ST2 819 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 CWH43Q9H720 699 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 TBC1D17Q9HA65 648 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 ZNF287Q9HBT7 754 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 ENTPD7Q9NQZ7 604 aa12.97□□□□□ -0.33
GGA3-206ENST00000578773 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 TBKBP1A7MCY6 615 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 OPLAHO14841 1288 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 IPO8O15397 1037 aaKnown RBP12.96□□□□□ -0.33
GGA3-206ENST00000578773 SRGAP2BP0DMP2 458 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 SCG2P13521 617 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 TDGQ13569 410 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.33
GGA3-206ENST00000578773 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 APPBP2Q92624 585 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 TYW1Q9NV66 732 aaKnown RBP12.96□□□□□ -0.33
GGA3-206ENST00000578773 DBR1Q9UK59 544 aaKnown RBP12.96□□□□□ -0.33
GGA3-206ENST00000578773 PCDHB12Q9Y5F1 795 aa12.96□□□□□ -0.33
GGA3-206ENST00000578773 PATL2C9JE40 543 aaKnown RBP12.95□□□□□ -0.34
GGA3-206ENST00000578773 CLASP2O75122 1294 aaKnown RBP12.95□□□□□ -0.34
GGA3-206ENST00000578773 KCNA4P22459 653 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms