RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CAPNS1P04632 268 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 NKX3-2P78367 333 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 MAP4K2Q12851 820 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 RGL3Q3MIN7 710 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 PRR31Q5SQ13 230 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 STEAP3Q658P3 488 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 STK32CQ86UX6 486 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
SMG1-206ENST00000562668 CHAMP1Q96JM3 812 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 EPB41L1Q9H4G0 881 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 CLDND1Q9NY35 253 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 CCDC9Q9Y3X0 531 aaKnown RBP6.71□□□□□ -1.34
SMG1-206ENST00000562668 PIK3C2BO00750 1634 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 WASHC2CQ9Y4E1 1318 aa6.71□□□□□ -1.34
SMG1-206ENST00000562668 RAB3GAP2Q9H2M9 1393 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 HGSO14964 777 aaPredicted RBP6.7□□□□□ -1.34
SMG1-206ENST00000562668 PPP2R2AP63151 447 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 ADAM9Q13443 819 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 ZNF827Q17R98 1081 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 HHIPL2Q6UWX4 724 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 KCTD13Q8WZ19 329 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 DTLQ9NZJ0 730 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 R3HCC1Q9Y3T6 440 aaKnown RBP6.7□□□□□ -1.34
SMG1-206ENST00000562668 NPFFR2Q9Y5X5 522 aa6.7□□□□□ -1.34
SMG1-206ENST00000562668 RPRD2Q5VT52 1461 aaKnown RBP6.7□□□□□ -1.34
SMG1-206ENST00000562668 CFAP65Q6ZU64 1925 aaKnown RBP6.7□□□□□ -1.34
SMG1-206ENST00000562668 NUP155O75694 1391 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 SETD1BQ9UPS6 1966 aaKnown RBP6.69□□□□□ -1.34
SMG1-206ENST00000562668 PLA2R1Q13018 1463 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 TCRBV5S2A0A599 114 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 DGKIO75912 1065 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 ITGB3P05106 788 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 DNAJA1P31689 397 aaKnown RBP6.69□□□□□ -1.34
SMG1-206ENST00000562668 GRIA2P42262 883 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 ARRDC4Q8NCT1 418 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMG1-206ENST00000562668 TOE1Q96GM8 510 aaKnown RBP6.69□□□□□ -1.34
SMG1-206ENST00000562668 SPHKAPQ2M3C7 1700 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 UBR1Q8IWV7 1749 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 CEP170BQ9Y4F5 1589 aaPredicted RBP6.69□□□□□ -1.34
SMG1-206ENST00000562668 KANK1Q14678 1352 aa6.69□□□□□ -1.34
SMG1-206ENST00000562668 PTPRTO14522 1441 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 KDM5AP29375 1690 aaKnown RBP6.68□□□□□ -1.34
SMG1-206ENST00000562668 A0A1W2PQU0 124 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 MROH6A6NGR9 719 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 TADA3O75528 432 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 ZNF28P17035 718 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 DDR2Q16832 855 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 BORAQ6PGQ7 559 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 FAM124AQ86V42 546 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 LGI4Q8N135 537 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 CELF2-AS1Q8N7Q2 184 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 IER2Q9BTL4 223 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 MYOTQ9UBF9 498 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 UGGT1Q9NYU2 1555 aa6.68□□□□□ -1.34
SMG1-206ENST00000562668 A2ML1A8K2U0 1454 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 STRCQ7RTU9 1775 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 TRPM2O94759 1503 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 PLATP00750 562 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 MCTP2Q6DN12 878 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 TEPPQ6URK8 271 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 ANKS3Q6ZW76 656 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 GGNQ86UU5 652 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 TXNDC5Q8NBS9 432 aaKnown RBP6.67□□□□□ -1.34
SMG1-206ENST00000562668 PHOSPHO1Q8TCT1 267 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 ZSWIM3Q96MP5 696 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 RBM15Q96T37 977 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMG1-206ENST00000562668 ST7Q9NRC1 585 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 GPR27Q9NS67 375 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 CLTCL1P53675 1640 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 TNRQ92752 1358 aa6.67□□□□□ -1.34
SMG1-206ENST00000562668 MYO5BQ9ULV0 1848 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 NLRP1Q9C000 1473 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 TMEM131LA2VDJ0 1609 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 DDX3XO00571 662 aaKnown RBP eCLIP6.66□□□□□ -1.34
SMG1-206ENST00000562668 MAFKO60675 156 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 MAGEA10P43363 369 aaPredicted RBP6.66□□□□□ -1.34
SMG1-206ENST00000562668 PRAMEF18Q5VWM3 479 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 CYP4F22Q6NT55 531 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 SLC43A3Q8NBI5 491 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 ZNF428Q96B54 188 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 CLIC6Q96NY7 704 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 WRNIP1Q96S55 665 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 PHF20Q9BVI0 1012 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
SMG1-206ENST00000562668 DLX3O60479 287 aa6.65□□□□□ -1.34
SMG1-206ENST00000562668 HSP90AA2PQ14568 343 aaPredicted RBP6.65□□□□□ -1.34
SMG1-206ENST00000562668 TBC1D10BQ4KMP7 808 aaPredicted RBP6.65□□□□□ -1.34
SMG1-206ENST00000562668 RSPO2Q6UXX9 243 aaPredicted RBP6.65□□□□□ -1.34
SMG1-206ENST00000562668 USP53Q70EK8 1073 aa6.65□□□□□ -1.34
SMG1-206ENST00000562668 SGSM3Q96HU1 749 aa6.65□□□□□ -1.34
SMG1-206ENST00000562668 LCORQ96JN0 433 aaPredicted RBP6.65□□□□□ -1.34
SMG1-206ENST00000562668 TMEM209Q96SK2 561 aa6.65□□□□□ -1.34
SMG1-206ENST00000562668 GMLQ99445 158 aa6.65□□□□□ -1.34
SMG1-206ENST00000562668 AARSD1Q9BTE6 412 aaKnown RBP6.65□□□□□ -1.34
SMG1-206ENST00000562668 SMOC1Q9H4F8 434 aa6.65□□□□□ -1.34
SMG1-206ENST00000562668 SMPD4Q9NXE4 827 aa6.65□□□□□ -1.34
SMG1-206ENST00000562668 INVSQ9Y283 1065 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms