RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 PITPNM2Q9BZ72 1349 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 IGF2BP3O00425 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 ZNF853P0CG23 659 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 PLCG1P19174 1290 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 CAP2P40123 477 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 CTSWP56202 376 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 ANAPC15P60006 121 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 PRKCQQ04759 706 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 PRKG1Q13976 671 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 MPP2Q14168 576 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 RASA3Q14644 834 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 PLCL1Q15111 1095 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 DACT2Q5SW24 774 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 MCTP1Q6DN14 999 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 LETMD1Q6P1Q0 360 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 REC114Q7Z4M0 266 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 C8orf58Q8NAV2 365 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 ACSF2Q96CM8 615 aaPredicted RBP6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 TMEM87BQ96K49 555 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 HRASLS5Q96KN8 279 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 GREM2Q9H772 168 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 ST7Q9NRC1 585 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 VAV3Q9UKW4 847 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 MAP3K2Q9Y2U5 619 aa6.86□□□□□ -1.31
HNRNPC-233ENST00000557768 WNT10BO00744 389 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 APAF1O14727 1248 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 CD8BP10966 210 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 TAL1P17542 331 aaPredicted RBP6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 KLRK1P26718 216 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 TM4SF4P48230 202 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 ZNF165P49910 485 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 CCT4P50991 539 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 GNAI1P63096 354 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 IFRD2Q12894 506 aaPredicted RBP6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 CWF19L2Q2TBE0 894 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 CDH24Q86UP0 819 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 TTLL11Q8NHH1 800 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 CDC5LQ99459 802 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 DNAJC7Q99615 494 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 LRRC3Q9BY71 257 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 CCDC113Q9H0I3 377 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 SLKQ9H2G2 1235 aaPredicted RBP6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 R3HDMLQ9H3Y0 253 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 CWC22Q9HCG8 908 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 IFT57Q9NWB7 429 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 MINPP1Q9UNW1 487 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 FZD1Q9UP38 647 aa6.85□□□□□ -1.31
HNRNPC-233ENST00000557768 PI4KAP2A4QPH2 592 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 PRR33A8MZF0 331 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 PPP1R12AO14974 1030 aaPredicted RBP6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 RAB11FIP3O75154 756 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 DDX58O95786 925 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 CBX7O95931 251 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 IGKV5-2P06315 115 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 NF2P35240 595 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 PKN2Q16513 984 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 NKPD1Q17RQ9 610 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 STRIP1Q5VSL9 837 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 SLC6A19Q695T7 634 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 WFDC3Q8IUB2 231 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 CELF2-AS1Q8N7Q2 184 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 TSPYL6Q8N831 410 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 FAM169BQ8N8A8 192 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 PI4KAP1Q8N8J0 262 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 SH3TC2Q8TF17 1288 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 TNKS2Q9H2K2 1166 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 FANCLQ9NW38 375 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 ACTR10Q9NZ32 417 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 MAPK8IP1Q9UQF2 711 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 ZSWIM8A7E2V4 1837 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 ARAP2Q8WZ64 1704 aa6.84□□□□□ -1.31
HNRNPC-233ENST00000557768 SSC5DA1L4H1 1573 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 ZNF804BA4D1E1 1349 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 MYO3BQ8WXR4 1341 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 UPK3BL1B0FP48 263 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 UPK3BL2E5RIL1 263 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 DNAJA2O60884 412 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 DNAJC6O75061 913 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 FKTNO75072 461 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 CDC45O75419 566 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 GIPRP48546 466 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 CALD1Q05682 793 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 SREBF2Q12772 1141 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 PLEKHG4Q58EX7 1191 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 CDKAL1Q5VV42 579 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 CCDC30Q5VVM6 783 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 TTLL5Q6EMB2 1281 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 FBXO46Q6PJ61 603 aaPredicted RBP6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 KSR2Q6VAB6 950 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 GK5Q6ZS86 529 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 G2E3Q7L622 706 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 ARMC9Q7Z3E5 817 aa6.83□□□□□ -1.32
HNRNPC-233ENST00000557768 UBE3BQ7Z3V4 1068 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms