RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ZSWIM8A7E2V4 1837 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-223ENST00000557076 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-223ENST00000557076 MSCO60682 206 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 CYP2B6P20813 491 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 ARNTP27540 789 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 CD96P40200 585 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 TCP10Q12799 353 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 PABPC4Q13310 644 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-223ENST00000557076 CCDC57Q2TAC2 916 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 ZC3H12AQ5D1E8 599 aaKnown RBP5.93□□□□□ -1.46
SCFD1-223ENST00000557076 CDC42EP5Q6NZY7 148 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 VPS37DQ86XT2 251 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 KSR1Q8IVT5 923 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 TOP6BLQ8N6T0 577 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 C8orf58Q8NAV2 365 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 LINS1Q8NG48 757 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 SOCS4Q8WXH5 440 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 LPAR1Q92633 364 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 BADQ92934 168 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 SLC38A3Q99624 504 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 MYH16Q9H6N6 1097 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 THEGQ9P2T0 379 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 MORF4L1Q9UBU8 362 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 GTF2IRD1Q9UHL9 959 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 PLAGL2Q9UPG8 496 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 U3KQE9 123 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 ALPK3Q96L96 1907 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 MAST3O60307 1309 aa5.93□□□□□ -1.46
SCFD1-223ENST00000557076 CHD9Q3L8U1 2897 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 TRIM75PA6NK02 468 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 DNM1LO00429 736 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 FRAT2O75474 233 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-223ENST00000557076 ZKSCAN1P17029 563 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-223ENST00000557076 NME2P22392 152 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 CCND3P30281 292 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-223ENST00000557076 MAPK4P31152 587 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 RTP1P59025 263 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 GNAI1P63096 354 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 CAVIN4Q5BKX8 364 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 TREML2Q5T2D2 321 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 LMBR1LQ6UX01 489 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 SLC39A5Q6ZMH5 540 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 ZFPM1Q8IX07 1006 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 ARRDC4Q8NCT1 418 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 GPRC5AQ8NFJ5 357 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 ASB11Q8WXH4 323 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 RUNDC1Q96C34 613 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 BCO2Q9BYV7 579 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 ASCC2Q9H1I8 757 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-223ENST00000557076 CNNM1Q9NRU3 951 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 IFT57Q9NWB7 429 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 FAM53CQ9NYF3 392 aa5.92□□□□□ -1.46
SCFD1-223ENST00000557076 LRRFIP2Q9Y608 721 aaKnown RBP5.92□□□□□ -1.46
SCFD1-223ENST00000557076 CHD7Q9P2D1 2997 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 TRIM43BA6NCK2 446 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 ENTPD3O75355 529 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 ITIH2P19823 946 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 HOXA7P31268 230 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 RGS2P41220 211 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 CALD1Q05682 793 aaKnown RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 PDE4CQ08493 712 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 TRIM26Q12899 539 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 SPP2Q13103 211 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 CHAF1AQ13111 956 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 SNX17Q15036 470 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 ZNF124Q15973 351 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 AAK1Q2M2I8 961 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 TAF7LQ5H9L4 462 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 TMEM31Q5JXX7 168 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 BHLHE22Q8NFJ8 381 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 WDR66Q8TBY9 1149 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 CCER1Q8TC90 406 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 GPBAR1Q8TDU6 330 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 TRIM43Q96BQ3 446 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 TIFAQ96CG3 184 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 RNPC3Q96LT9 517 aaKnown RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 P2RX7Q99572 595 aaKnown RBP5.91□□□□□ -1.46
SCFD1-223ENST00000557076 IDI2Q9BXS1 227 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 STK31Q9BXU1 1019 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 PCGF6Q9BYE7 350 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 EPHX3Q9H6B9 360 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 TACC3Q9Y6A5 838 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 DLG5Q8TDM6 1919 aa5.91□□□□□ -1.46
SCFD1-223ENST00000557076 OTOFQ9HC10 1997 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 ZNF252P-AS1Q0IIN9 211 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 MFSD14CQ5VZR4 134 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 TSPYL6Q8N831 410 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 STK35Q8TDR2 534 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 DNAAF4Q8WXU2 420 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 PPM1EQ8WY54 764 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 EDC3Q96F86 508 aaKnown RBP5.9□□□□□ -1.46
SCFD1-223ENST00000557076 FAM84AQ96KN4 292 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 CACNA2D2Q9NY47 1150 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 RBPJLQ9UBG7 517 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 DDX20Q9UHI6 824 aaKnown RBP5.9□□□□□ -1.46
SCFD1-223ENST00000557076 AKAP2Q9Y2D5 859 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.46
SCFD1-223ENST00000557076 SAMM50Q9Y512 469 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms