RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SP9P0CG40 484 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 STAG3L1P0CL83 205 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 NPR3P17342 541 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 SLC1A4P43007 532 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 SERPINB4P48594 390 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ZNF200P98182 395 aaPredicted RBP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 TDGQ13569 410 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 BMS1Q14692 1282 aaKnown RBP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 NONOQ15233 471 aaKnown RBP eCLIP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 KIAA0753Q2KHM9 967 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 PPM1JQ5JR12 505 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 FAM43BQ6ZT52 329 aaPredicted RBP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ADGRD2Q7Z7M1 963 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 SERINC5Q86VE9 423 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 C1orf210Q8IVY1 113 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 PHTF2Q8N3S3 785 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 SUMF1Q8NBK3 374 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 GMCL1P1Q8NEA9 526 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 RASGRP4Q8TDF6 673 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 GIPC2Q8TF65 315 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 SDR42E1Q8WUS8 393 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 KAT2BQ92831 832 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 COPS5Q92905 334 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ATP6V0A1Q93050 837 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ACSF2Q96CM8 615 aaPredicted RBP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ZNF689Q96CS4 500 aaPredicted RBP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 API5Q9BZZ5 524 aaKnown RBP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ADAM7Q9H2U9 754 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
CKAP4-203ENST00000553039 CYP26B1Q9NR63 512 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 KIAA1468Q9P260 1216 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 WNT16Q9UBV4 365 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 CCPG1Q9ULG6 757 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 GPSM3Q9Y4H4 160 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 DCHS1Q96JQ0 3298 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 ADGRA3Q8IWK6 1321 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 TRIOO75962 3097 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 FLNBO75369 2602 aaKnown RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 C17orf102A2RUQ5 167 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 C2CD4DB7Z1M9 353 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 TBC1D4O60343 1298 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 DGKIO75912 1065 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 GLP2RO95838 553 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 TTLL1O95922 423 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 RASA1P20936 1047 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 SP100P23497 879 aaPredicted RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 DUSP6Q16828 381 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 ZNF528Q3MIS6 628 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 ALDH1L2Q3SY69 923 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 MUM1L1Q5H9M0 696 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 RCSD1Q6JBY9 416 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 LRSAM1Q6UWE0 723 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 RNF207Q6ZRF8 634 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 CHST3Q7LGC8 479 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 TAS1R3Q7RTX0 852 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 CMTR2Q8IYT2 770 aaKnown RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 FAM177A1Q8N128 213 aaPredicted RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 SIX5Q8N196 739 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 TDRD5Q8NAT2 981 aaKnown RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 NETO1Q8TDF5 533 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 SSH1Q8WYL5 1049 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 CASP10Q92851 521 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 DRC1Q96MC2 740 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 GPR20Q99678 358 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 MAF1Q9H063 256 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 NGRNQ9NPE2 291 aaKnown RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 USP18Q9UMW8 372 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 SIT1Q9Y3P8 196 aa6.09□□□□□ -1.43
CKAP4-203ENST00000553039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 DDX49Q9Y6V7 483 aaKnown RBP6.09□□□□□ -1.43
CKAP4-203ENST00000553039 SCN5AQ14524 2016 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 OTOGLQ3ZCN5 2332 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 ZNF532Q9HCE3 1301 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 HAS3O00219 553 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SLC30A4O14863 429 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 FOXD2O60548 495 aaPredicted RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SURF6O75683 361 aaKnown RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 F12P00748 615 aaPredicted RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 GNAI2P04899 355 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 ICAM1P05362 532 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 ASGR2P07307 311 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 LINC00271P0C7V0 271 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 PDE6AP16499 860 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 CDK11BP21127 795 aaKnown RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 DNAJB1P25685 340 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 CALML3P27482 149 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SHC2P98077 582 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 NCOA4Q13772 614 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 STXBP2Q15833 593 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 MAP7D1Q3KQU3 841 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SPOUT1Q5T280 376 aaKnown RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 CWF19L1Q69YN2 538 aaKnown RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 CCDC62Q6P9F0 684 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SYCE2Q6PIF2 218 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 KCNV1Q6PIU1 500 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SEPT14Q6ZU15 432 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 OTOP3Q7RTS5 596 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 TMEM87AQ8NBN3 555 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SREK1Q8WXA9 508 aaKnown RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 RIN2Q8WYP3 895 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms