RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 VTI1BQ9UEU0 232 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 IL16Q14005 1332 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 EYA2O00167 538 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 ENC1O14682 589 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 WISP1O95388 367 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 CYP11A1P05108 521 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 ADCYAP1R1P41586 468 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 CHRNA4P43681 627 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 ST13P50502 369 aaKnown RBP7.82□□□□□ -1.16
VPS13B-211ENST00000522802 MECOMQ03112 1051 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 TFF2Q03403 129 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 TLE2Q04725 743 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 FPGSQ05932 587 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 EXOSC9Q06265 439 aaKnown RBP7.82□□□□□ -1.16
VPS13B-211ENST00000522802 DUOXA2Q1HG44 320 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 FAM47AQ5JRC9 791 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 AKNAD1Q5T1N1 836 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 MEI1Q5TIA1 1274 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 WDR78Q5VTH9 848 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 KIAA1211Q6ZU35 1233 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 CCAR1Q8IX12 1150 aaKnown RBP7.82□□□□□ -1.16
VPS13B-211ENST00000522802 EDC3Q96F86 508 aaKnown RBP7.82□□□□□ -1.16
VPS13B-211ENST00000522802 CRELD1Q96HD1 420 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 WDR18Q9BV38 432 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 C1QTNF1Q9BXJ1 281 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 BCL11AQ9H165 835 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 AS3MTQ9HBK9 375 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 CWC22Q9HCG8 908 aaKnown RBP7.82□□□□□ -1.16
VPS13B-211ENST00000522802 ABCF2Q9UG63 623 aa7.82□□□□□ -1.16
VPS13B-211ENST00000522802 GPR75-ASB3A0A0A6YYF3 556 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 GRXCR1A8MXD5 290 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 F8W735 103 aaPredicted RBP7.81□□□□□ -1.16
VPS13B-211ENST00000522802 FBXO24O75426 580 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 CLTBP09497 229 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 HOXC6P09630 235 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 VAMP1P23763 118 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 KCNQ1P51787 676 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 AP3B2Q13367 1082 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 GRB14Q14449 540 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 SV2BQ7L1I2 683 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.81□□□□□ -1.16
VPS13B-211ENST00000522802 UBASH3BQ8TF42 649 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 LRFN3Q9BTN0 628 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 SIL1Q9H173 461 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 EPHX3Q9H6B9 360 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 GPN3Q9UHW5 284 aaPredicted RBP7.81□□□□□ -1.16
VPS13B-211ENST00000522802 DENND2AQ9ULE3 1009 aa7.81□□□□□ -1.16
VPS13B-211ENST00000522802 LOC100289279A0A1B0GTE1 492 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-211ENST00000522802 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-211ENST00000522802 MEGF11A6BM72 1044 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 FAM86C2PA6NEL3 165 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 SLC15A5A6NIM6 579 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 KIAA0355O15063 1070 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 PQBP1O60828 265 aaKnown RBP7.8□□□□□ -1.16
VPS13B-211ENST00000522802 DLGAP3O95886 979 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 MAOBP27338 520 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 MBTPS1Q14703 1052 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 POU4F3Q15319 338 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 LRRC41Q15345 812 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 ZYXQ15942 572 aaKnown RBP7.8□□□□□ -1.16
VPS13B-211ENST00000522802 ARRDC4Q8NCT1 418 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 SNX27Q96L92 541 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS13B-211ENST00000522802 AKTIPQ9H8T0 292 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 GNL3LQ9NVN8 582 aaKnown RBP7.8□□□□□ -1.16
VPS13B-211ENST00000522802 BTBD7Q9P203 1132 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 ZBTB21Q9ULJ3 1066 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 PARP14Q460N5 1801 aa7.8□□□□□ -1.16
VPS13B-211ENST00000522802 COL4A4P53420 1690 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-211ENST00000522802 MYO5AQ9Y4I1 1855 aaKnown RBP7.79□□□□□ -1.16
VPS13B-211ENST00000522802 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 SEPT4O43236 478 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 PAGE1O75459 146 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 ASNSP08243 561 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 RAG1P15918 1043 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 BMP6P22004 513 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 NME2P22392 152 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 DDX10Q13206 875 aaKnown RBP7.79□□□□□ -1.16
VPS13B-211ENST00000522802 PRAMEF19Q5SWL8 479 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 ZGPATQ8N5A5 531 aaKnown RBP7.79□□□□□ -1.16
VPS13B-211ENST00000522802 STK35Q8TDR2 534 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 SH3RF3Q8TEJ3 882 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-211ENST00000522802 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 BACH2Q9BYV9 841 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 KIAA1522Q9P206 1035 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-211ENST00000522802 HERC5Q9UII4 1024 aaKnown RBP7.79□□□□□ -1.16
VPS13B-211ENST00000522802 RABGAP1Q9Y3P9 1069 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 SMCHD1A6NHR9 2005 aa7.79□□□□□ -1.16
VPS13B-211ENST00000522802 PDS5AQ29RF7 1337 aaKnown RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 A0A1W2PQ45 241 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 A0A1W2PQY0 241 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 C19orf81C9J6K1 198 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 GLRX3O76003 335 aaKnown RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 ALX3O95076 343 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 ECEL1O95672 775 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 CTSBP07858 339 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 CELA3AP09093 270 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 VCAM1P19320 739 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms