RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
SPIDR-205ENST00000518060 ZBTB10Q96DT7 871 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 ZNF577Q9BSK1 485 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 RNF26Q9BY78 433 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-205ENST00000518060 ZMYND12Q9H0C1 365 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 DOCK5Q9H7D0 1870 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 CDH23Q9H251 3354 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 NFASCO94856 1347 aa12.03□□□□□ -0.48
SPIDR-205ENST00000518060 LCHNA4D1U4 455 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 FAM86B1E9PN63 330 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 MEIS1O00470 390 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 ADAMTS3O15072 1205 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 ARHGEF15O94989 841 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 FAM86B2P0C5J1 330 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 INSRRP14616 1297 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 STAT5BP51692 787 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 SETQ01105 290 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-205ENST00000518060 TAP1Q03518 808 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 PRR16Q569H4 304 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 FAM160B1Q5W0V3 765 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 NIPA1Q7RTP0 329 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 FBXL16Q8N461 479 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 DNAJB3Q8WWF6 145 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 TNPO1Q92973 898 aaKnown RBP12.02□□□□□ -0.49
SPIDR-205ENST00000518060 AGXT2Q9BYV1 514 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
SPIDR-205ENST00000518060 PRDM6Q9NQX0 595 aa12.02□□□□□ -0.49
SPIDR-205ENST00000518060 RRN3P2A6NIE6 340 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 M0QZ92 97 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 IPO5O00410 1097 aaKnown RBP12.01□□□□□ -0.49
SPIDR-205ENST00000518060 UPP2O95045 317 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 GJB5O95377 273 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 TMEM62Q0P6H9 643 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 PLCB4Q15147 1175 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 NTRK3Q16288 839 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 MIS18BP1Q6P0N0 1132 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 TRMT1LQ7Z2T5 733 aaKnown RBP12.01□□□□□ -0.49
SPIDR-205ENST00000518060 IL27Q8NEV9 243 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 TRAPPC12Q8WVT3 735 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 YME1L1Q96TA2 773 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 PCYT2Q99447 389 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 RAD9AQ99638 391 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 TM6SF1Q9BZW5 370 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 ZNF302Q9NR11 478 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 SAMM50Q9Y512 469 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 TRIP12Q14669 1992 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-205ENST00000518060 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
SPIDR-205ENST00000518060 GBF1Q92538 1859 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 POTEB3A0JP26 581 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 EPOPA6NHQ4 379 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 DEXIO95424 95 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 CCNE2O96020 404 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 IBSPP21815 317 aaPredicted RBP12□□□□□ -0.49
SPIDR-205ENST00000518060 EVCP57679 992 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 MRPS6P82932 125 aaKnown RBP12□□□□□ -0.49
SPIDR-205ENST00000518060 PDXDC2PQ6P474 469 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 POTEBQ6S5H4 581 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 SPRED2Q7Z698 418 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 TET1Q8NFU7 2136 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 GDPD5Q8WTR4 605 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 ZNF274Q96GC6 653 aaPredicted RBP12□□□□□ -0.49
SPIDR-205ENST00000518060 OSBPL7Q9BZF2 842 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 SLKQ9H2G2 1235 aaPredicted RBP12□□□□□ -0.49
SPIDR-205ENST00000518060 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
SPIDR-205ENST00000518060 GINS2Q9Y248 185 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 CDY2AQ9Y6F7 541 aa12□□□□□ -0.49
SPIDR-205ENST00000518060 IGLV3-22A0A075B6J6 115 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 CHMP2AO43633 222 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 CDKL5O76039 1030 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 CHRNA1P02708 482 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 CYP3A4P08684 503 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 ADAM17P78536 824 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 FAM26DQ5JW98 314 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 MARCH8Q5T0T0 291 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 IER5Q5VY09 327 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 KRT40Q6A162 431 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 SWSAP1Q6NVH7 229 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 PLPPR4Q7Z2D5 763 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 CCDC60Q8IWA6 550 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-205ENST00000518060 APBB2Q92870 758 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 TGS1Q96RS0 853 aaKnown RBP11.99□□□□□ -0.49
SPIDR-205ENST00000518060 COL25A1Q9BXS0 654 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-205ENST00000518060 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 TBC1D22BQ9NU19 505 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 THEGQ9P2T0 379 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 INSL6Q9Y581 213 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 A0A0C4DFX4 3053 aa11.99□□□□□ -0.49
SPIDR-205ENST00000518060 MBLAC1A4D2B0 266 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-205ENST00000518060 LINC01553A4QN01 128 aa11.98□□□□□ -0.49
SPIDR-205ENST00000518060 GAS7O60861 476 aa11.98□□□□□ -0.49
SPIDR-205ENST00000518060 PSAPP07602 524 aa11.98□□□□□ -0.49
SPIDR-205ENST00000518060 SLC26A2P50443 739 aa11.98□□□□□ -0.49
SPIDR-205ENST00000518060 KRT76Q01546 638 aa11.98□□□□□ -0.49
SPIDR-205ENST00000518060 GRB10Q13322 594 aa11.98□□□□□ -0.49
SPIDR-205ENST00000518060 LPIN1Q14693 890 aa11.98□□□□□ -0.49
SPIDR-205ENST00000518060 ZNF746Q6NUN9 644 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-205ENST00000518060 MTHFD1LQ6UB35 978 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms