RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 USP17L22D6RA61 530 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 USP17L17D6RBQ6 530 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 USP17L19D6RCP7 530 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 USP17L20D6RJB6 530 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
UBXN11-215ENST00000494942 PLSCR1O15162 318 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 MED24O75448 989 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 HEXIM1O94992 359 aaKnown RBP16.33■□□□□ 0.2
UBXN11-215ENST00000494942 FTCDO95954 541 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 CORO7P57737 925 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 MRPS25P82663 173 aaKnown RBP16.33■□□□□ 0.2
UBXN11-215ENST00000494942 USP17L24Q0WX57 530 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 QRICH1Q2TAL8 776 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 MREGQ8N565 214 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.33■□□□□ 0.2
UBXN11-215ENST00000494942 HDAC9Q9UKV0 1011 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 GLI1P08151 1106 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 ANXA13P27216 316 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 ARID5AQ03989 594 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 CCDC125Q86Z20 511 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 TAF4BQ92750 862 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 MKL1Q969V6 931 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.2
UBXN11-215ENST00000494942 MXD3Q9BW11 206 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 EPB41L5Q9HCM4 733 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 ARMCX3Q9UH62 379 aaPredicted RBP16.33■□□□□ 0.2
UBXN11-215ENST00000494942 DNM3Q9UQ16 869 aa16.33■□□□□ 0.2
UBXN11-215ENST00000494942 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
UBXN11-215ENST00000494942 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-215ENST00000494942 CALUO43852 315 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-215ENST00000494942 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
UBXN11-215ENST00000494942 TNNC1P63316 161 aa16.32■□□□□ 0.2
UBXN11-215ENST00000494942 SKOR1P84550 965 aa16.32■□□□□ 0.2
UBXN11-215ENST00000494942 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-215ENST00000494942 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-215ENST00000494942 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
UBXN11-215ENST00000494942 CDC42EP5Q6NZY7 148 aa16.32■□□□□ 0.2
UBXN11-215ENST00000494942 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
UBXN11-215ENST00000494942 CERS5Q8N5B7 392 aa16.32■□□□□ 0.2
UBXN11-215ENST00000494942 ZHX3Q9H4I2 956 aa16.32■□□□□ 0.2
UBXN11-215ENST00000494942 RIMBP2O15034 1052 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 RPA1P27694 616 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 BAG6P46379 1132 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 GIT2Q14161 759 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 Q4G0T1 1027 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 SYT2Q8N9I0 419 aaPredicted RBP16.31■□□□□ 0.2
UBXN11-215ENST00000494942 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
UBXN11-215ENST00000494942 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 WHAMMQ8TF30 809 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
UBXN11-215ENST00000494942 LRRC4BQ9NT99 713 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 POTEFA5A3E0 1075 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 PDXKO00764 312 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 EIF3HO15372 352 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBXN11-215ENST00000494942 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 CARSP49589 748 aaKnown RBP16.31■□□□□ 0.2
UBXN11-215ENST00000494942 ARHGAP4P98171 946 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 CFAP58Q5T655 872 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 POTEGQ6S5H5 508 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 POTEEQ6S8J3 1075 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 EPM2AIP1Q7L775 607 aaPredicted RBP16.31■□□□□ 0.2
UBXN11-215ENST00000494942 IRF2BP2Q7Z5L9 587 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 CATSPER3Q86XQ3 398 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 IQCKQ8N0W5 287 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 CRYGNQ8WXF5 182 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 ZIM3Q96PE6 472 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 METTL14Q9HCE5 456 aaKnown RBP16.31■□□□□ 0.2
UBXN11-215ENST00000494942 NYAP2Q9P242 653 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 FBXL5Q9UKA1 691 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 NFU1Q9UMS0 254 aa16.31■□□□□ 0.2
UBXN11-215ENST00000494942 MEIS2O14770 477 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
UBXN11-215ENST00000494942 UCHL3P15374 230 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 STAT3P40763 770 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 PTK2Q05397 1052 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 RPS6KA1Q15418 735 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 EXOC3L4Q17RC7 722 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 CD302Q8IX05 232 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 PBKQ96KB5 322 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 FAM20AQ96MK3 541 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 KRT12Q99456 494 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 SHTN1A0MZ66 631 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 FOSP01100 380 aaPredicted RBP16.3■□□□□ 0.2
UBXN11-215ENST00000494942 RPL13P26373 211 aaKnown RBP16.3■□□□□ 0.2
UBXN11-215ENST00000494942 PRKCIP41743 596 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 GNGT1P63211 74 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 TTMPQ5BVD1 217 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms