RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 RPLP2P05387 115 aaKnown RBP17.5■□□□□ 0.39
TRIM50-203ENST00000488217 STAT5BP51692 787 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 KRT32Q14532 448 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 LEXMQ3ZCV2 418 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 FBXO47Q5MNV8 452 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 IER5Q5VY09 327 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
TRIM50-203ENST00000488217 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 FIBCD1Q8N539 461 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 TCEANC2Q96MN5 208 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 GLT8D2Q9H1C3 349 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 MYH7BA7E2Y1 1941 aa17.5■□□□□ 0.39
TRIM50-203ENST00000488217 NFASCO94856 1347 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 MYH6P13533 1939 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 ATG7O95352 703 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 RB1P06400 928 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 HMGB1P09429 215 aaKnown RBP17.49■□□□□ 0.39
TRIM50-203ENST00000488217 KCNA5P22460 613 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 ZNF76P36508 570 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 ACTR2P61160 394 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 ADCK5Q3MIX3 580 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 PPP1R18Q6NYC8 613 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 BANK1Q8NDB2 785 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 EPHX3Q9H6B9 360 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 AGO4Q9HCK5 861 aaKnown RBP17.49■□□□□ 0.39
TRIM50-203ENST00000488217 FAM217BQ9NTX9 383 aaPredicted RBP17.49■□□□□ 0.39
TRIM50-203ENST00000488217 BARHL2Q9NY43 387 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 PCDHA2Q9Y5H9 948 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 CDY2AQ9Y6F7 541 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 SQORQ9Y6N5 450 aa17.49■□□□□ 0.39
TRIM50-203ENST00000488217 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 STXBP3O00186 592 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 BMPR1AP36894 532 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 ADCY7P51828 1080 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 MRPS6P82932 125 aaKnown RBP17.48■□□□□ 0.39
TRIM50-203ENST00000488217 PLCB4Q15147 1175 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 RTN4RL1Q86UN2 441 aaPredicted RBP17.48■□□□□ 0.39
TRIM50-203ENST00000488217 NME8Q8N427 588 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.48■□□□□ 0.39
TRIM50-203ENST00000488217 ZBTB10Q96DT7 871 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 PGBD1Q96JS3 809 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 FAM49AQ9H0Q0 323 aaPredicted RBP17.48■□□□□ 0.39
TRIM50-203ENST00000488217 AGO3Q9H9G7 860 aaKnown RBP17.48■□□□□ 0.39
TRIM50-203ENST00000488217 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
TRIM50-203ENST00000488217 CNTNAP5Q8WYK1 1306 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 KLF18A0A0U1RQI7 1052 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 CDC27P30260 824 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 ADD1P35611 737 aaKnown RBP17.47■□□□□ 0.39
TRIM50-203ENST00000488217 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
TRIM50-203ENST00000488217 TSHZ1Q6ZSZ6 1077 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
TRIM50-203ENST00000488217 ANO3Q9BYT9 981 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 TMEM260Q9NX78 707 aa17.47■□□□□ 0.39
TRIM50-203ENST00000488217 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 POTEB3A0JP26 581 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 C5orf67F2Z3F1 127 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 CDC45O75419 566 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 CD52P31358 61 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 SREBF1P36956 1147 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 CLK2P49760 499 aaKnown RBP17.46■□□□□ 0.39
TRIM50-203ENST00000488217 SLC26A2P50443 739 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 RCAN1P53805 252 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 FGD1P98174 961 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 AP3B2Q13367 1082 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 PUS10Q3MIT2 529 aaKnown RBP17.46■□□□□ 0.39
TRIM50-203ENST00000488217 TIGD5Q53EQ6 642 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 POTEBQ6S5H4 581 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 NIPA1Q7RTP0 329 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 NEK9Q8TD19 979 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 ZNF689Q96CS4 500 aaPredicted RBP17.46■□□□□ 0.39
TRIM50-203ENST00000488217 FTHL17Q9BXU8 183 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
TRIM50-203ENST00000488217 CD320Q9NPF0 282 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 RAPGEFL1Q9UHV5 662 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 NAP1L2Q9ULW6 460 aaPredicted RBP17.46■□□□□ 0.39
TRIM50-203ENST00000488217 RWDD3Q9Y3V2 267 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 BDP1A6H8Y1 2624 aa17.46■□□□□ 0.39
TRIM50-203ENST00000488217 IGKV6D-21A0A0A0MT36 114 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 GRXCR2A6NFK2 248 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 M0QZ92 97 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 NCK2O43639 380 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 DGKIO75912 1065 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 TMEM62Q0P6H9 643 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 BTG3Q14201 252 aaPredicted RBP17.45■□□□□ 0.38
TRIM50-203ENST00000488217 PFKFB3Q16875 520 aaPredicted RBP17.45■□□□□ 0.38
TRIM50-203ENST00000488217 TCEAL5Q5H9L2 206 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 JAKMIP3Q5VZ66 844 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 ABHD15Q6UXT9 468 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 FAM178BQ8IXR5 827 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 TRAPPC12Q8WVT3 735 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 CLP1Q92989 425 aaKnown RBP17.45■□□□□ 0.38
TRIM50-203ENST00000488217 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
TRIM50-203ENST00000488217 PADI3Q9ULW8 664 aa17.45■□□□□ 0.38
TRIM50-203ENST00000488217 DHX15O43143 795 aaKnown RBP17.44■□□□□ 0.38
TRIM50-203ENST00000488217 CCNE2O96020 404 aa17.44■□□□□ 0.38
TRIM50-203ENST00000488217 CYP3A4P08684 503 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms