RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 PLPPR4Q7Z2D5 763 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 DBF4BQ8NFT6 615 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 PPM1EQ8WY54 764 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 LARP6Q9BRS8 491 aaKnown RBP22.6■■□□□ 1.21
MSH5-215ENST00000482280 SLKQ9H2G2 1235 aaPredicted RBP22.6■■□□□ 1.21
MSH5-215ENST00000482280 TBC1D22BQ9NU19 505 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 DOCK5Q9H7D0 1870 aa22.6■■□□□ 1.21
MSH5-215ENST00000482280 LAMA2P24043 3122 aaKnown RBP22.6■■□□□ 1.21
MSH5-215ENST00000482280 FAM86B1E9PN63 330 aa22.59■■□□□ 1.21
MSH5-215ENST00000482280 GTPBP6O43824 516 aaPredicted RBP22.59■■□□□ 1.21
MSH5-215ENST00000482280 FAM86B2P0C5J1 330 aa22.59■■□□□ 1.21
MSH5-215ENST00000482280 XBP1P17861 261 aa22.59■■□□□ 1.21
MSH5-215ENST00000482280 ITGB3BPQ13352 177 aaPredicted RBP22.59■■□□□ 1.21
MSH5-215ENST00000482280 PRR16Q569H4 304 aa22.59■■□□□ 1.21
MSH5-215ENST00000482280 TRAF7Q6Q0C0 670 aa22.59■■□□□ 1.21
MSH5-215ENST00000482280 APBB2Q92870 758 aa22.59■■□□□ 1.21
MSH5-215ENST00000482280 TRIP12Q14669 1992 aaPredicted RBP22.59■■□□□ 1.21
MSH5-215ENST00000482280 INSRRP14616 1297 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 DEFB103AP81534 67 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 MBTPS1Q14703 1052 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 PLEKHG4Q58EX7 1191 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 CKAP2LQ8IYA6 745 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 MYOCDQ8IZQ8 938 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 RASGRP4Q8TDF6 673 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 RAD9AQ99638 391 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 SAMM50Q9Y512 469 aa22.58■■□□□ 1.21
MSH5-215ENST00000482280 POTEB3A0JP26 581 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 DLL1O00548 723 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 ADAM17P78536 824 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 IER5Q5VY09 327 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 GALNT17Q6IS24 598 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 FAM117BQ6P1L5 589 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 POTEBQ6S5H4 581 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 FAM177A1Q8N128 213 aaPredicted RBP22.57■■□□□ 1.2
MSH5-215ENST00000482280 ARNTL2Q8WYA1 636 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 IFIH1Q9BYX4 1025 aaKnown RBP22.57■■□□□ 1.2
MSH5-215ENST00000482280 TSPYL2Q9H2G4 693 aaPredicted RBP22.57■■□□□ 1.2
MSH5-215ENST00000482280 ZNF302Q9NR11 478 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 PCDHA4Q9UN74 947 aa22.57■■□□□ 1.2
MSH5-215ENST00000482280 GJB5O95377 273 aa22.56■■□□□ 1.2
MSH5-215ENST00000482280 KRT76Q01546 638 aa22.56■■□□□ 1.2
MSH5-215ENST00000482280 FAM26DQ5JW98 314 aa22.56■■□□□ 1.2
MSH5-215ENST00000482280 PDXDC2PQ6P474 469 aa22.56■■□□□ 1.2
MSH5-215ENST00000482280 RPAINQ86UA6 219 aa22.56■■□□□ 1.2
MSH5-215ENST00000482280 SMAP1Q8IYB5 467 aaPredicted RBP22.56■■□□□ 1.2
MSH5-215ENST00000482280 DNAJB3Q8WWF6 145 aa22.56■■□□□ 1.2
MSH5-215ENST00000482280 FAM49AQ9H0Q0 323 aaPredicted RBP22.56■■□□□ 1.2
MSH5-215ENST00000482280 CERS4Q9HA82 394 aa22.56■■□□□ 1.2
MSH5-215ENST00000482280 IGLV3-22A0A075B6J6 115 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 MBLAC1A4D2B0 266 aaPredicted RBP22.55■■□□□ 1.2
MSH5-215ENST00000482280 PSAPP07602 524 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 USP11P51784 963 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 PLCB4Q15147 1175 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 ZNF746Q6NUN9 644 aaPredicted RBP22.55■■□□□ 1.2
MSH5-215ENST00000482280 RUFY4Q6ZNE9 571 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 MICALL1Q8N3F8 863 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 CRYGNQ8WXF5 182 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 UIMC1Q96RL1 719 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 PCYT2Q99447 389 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 INSL6Q9Y581 213 aa22.55■■□□□ 1.2
MSH5-215ENST00000482280 HBP1O60381 514 aa22.54■■□□□ 1.2
MSH5-215ENST00000482280 ATG7O95352 703 aa22.54■■□□□ 1.2
MSH5-215ENST00000482280 CCNE2O96020 404 aa22.54■■□□□ 1.2
MSH5-215ENST00000482280 CIITAP33076 1130 aa22.54■■□□□ 1.2
MSH5-215ENST00000482280 TAP1Q03518 808 aa22.54■■□□□ 1.2
MSH5-215ENST00000482280 CCDC85BQ15834 202 aaPredicted RBP22.54■■□□□ 1.2
MSH5-215ENST00000482280 SWSAP1Q6NVH7 229 aa22.54■■□□□ 1.2
MSH5-215ENST00000482280 TMCO2Q7Z6W1 182 aaPredicted RBP22.54■■□□□ 1.2
MSH5-215ENST00000482280 BLIDQ8IZY5 108 aa22.54■■□□□ 1.2
MSH5-215ENST00000482280 GHRP10912 638 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 MRPS6P82932 125 aaKnown RBP22.53■■□□□ 1.2
MSH5-215ENST00000482280 ABHD15Q6UXT9 468 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.53■■□□□ 1.28e-8■□□□□ 10.5
MSH5-215ENST00000482280 TBCKQ8TEA7 893 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 ATP8B4Q8TF62 1192 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 WASF1Q92558 559 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 PCDHA2Q9Y5H9 948 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 PCDHA10Q9Y5I2 948 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 GBF1Q92538 1859 aa22.53■■□□□ 1.2
MSH5-215ENST00000482280 WDR64B1ANS9 1081 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 GAS7O60861 476 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 CHRNA1P02708 482 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 SCRN1Q12765 414 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 TCTN1Q2MV58 587 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 MARCH8Q5T0T0 291 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 YME1L1Q96TA2 773 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 CDY2AQ9Y6F7 541 aa22.52■■□□□ 1.2
MSH5-215ENST00000482280 IGKV6D-21A0A0A0MT36 114 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 CCDC194A0A1B0GVG4 234 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 DHX15O43143 795 aaKnown RBP22.51■■□□□ 1.19
MSH5-215ENST00000482280 PFKFB2O60825 505 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 UPP2O95045 317 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 NONOQ15233 471 aaKnown RBP eCLIP22.51■■□□□ 1.19
MSH5-215ENST00000482280 SKIV2LQ15477 1246 aaKnown RBP22.51■■□□□ 1.19
MSH5-215ENST00000482280 ZNF484Q5JVG2 852 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 KRT25Q7Z3Z0 450 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 CCDC60Q8IWA6 550 aaPredicted RBP22.51■■□□□ 1.19
MSH5-215ENST00000482280 NME8Q8N427 588 aa22.51■■□□□ 1.19
MSH5-215ENST00000482280 USP38Q8NB14 1042 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms