RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 NDUFB10O96000 172 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 SF3A3Q12874 501 aaKnown RBP eCLIP15.45■□□□□ 0.066e-7■■■■■ 34.3
NPHP4-208ENST00000478423 Q3C1V9 767 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 TBC1D22BQ9NU19 505 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 ZNRF3Q9ULT6 936 aa15.45■□□□□ 0.06
NPHP4-208ENST00000478423 RGS16O15492 202 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-208ENST00000478423 USP11P51784 963 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 ALCAMQ13740 583 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 NSUN6Q8TEA1 469 aaKnown RBP15.44■□□□□ 0.06
NPHP4-208ENST00000478423 BEGAINQ9BUH8 593 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 MIS12Q9H081 205 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-208ENST00000478423 NDC80O14777 642 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 KAZNQ674X7 775 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 B4GALNT4Q76KP1 1039 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 PROM2Q8N271 834 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 GUF1Q8N442 669 aaKnown RBP15.44■□□□□ 0.06
NPHP4-208ENST00000478423 NLRP4Q96MN2 994 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 PPANQ9NQ55 473 aaKnown RBP15.44■□□□□ 0.06
NPHP4-208ENST00000478423 RIMS1Q86UR5 1692 aaKnown RBP15.44■□□□□ 0.06
NPHP4-208ENST00000478423 THAP12O43422 761 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 KRT81Q14533 505 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 HHIPL2Q6UWX4 724 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 ZBTB33Q86T24 672 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 CTAGE3PQ8IX95 158 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 C10orf67Q8IYJ2 551 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 PCDHA13Q9Y5I0 950 aa15.44■□□□□ 0.06
NPHP4-208ENST00000478423 NR3C1P04150 777 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 TROAPQ12815 778 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 INTS8Q75QN2 995 aaKnown RBP15.43■□□□□ 0.06
NPHP4-208ENST00000478423 RIOK1Q9BRS2 568 aaKnown RBP15.43■□□□□ 0.06
NPHP4-208ENST00000478423 CCSER1Q9C0I3 900 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 NUB1Q9Y5A7 615 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 DCCP43146 1447 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 ZNF233A6NK53 670 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 MAPK4P31152 587 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 JAK3P52333 1124 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 C16orf86Q6ZW13 317 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 LDHDQ86WU2 507 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 ANKRD36BP1Q96IX9 119 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 MED10Q9BTT4 135 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 GPR75-ASB3A0A0A6YYF3 556 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 ITIH3Q06033 890 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 STXBP2Q15833 593 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 PPP1R16BQ96T49 567 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 ABHD10Q9NUJ1 306 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 FBXO40Q9UH90 709 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 NCOA3Q9Y6Q9 1424 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 FCER1AP12319 257 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 CFAP157Q5JU67 520 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 DHX40Q8IX18 779 aaKnown RBP15.43■□□□□ 0.06
NPHP4-208ENST00000478423 MCPH1Q8NEM0 835 aa15.43■□□□□ 0.06
NPHP4-208ENST00000478423 ZNF526Q8TF50 670 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-208ENST00000478423 KRT76Q01546 638 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 KCNH2Q12809 1159 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 HHATQ5VTY9 493 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 TAB3Q8N5C8 712 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-208ENST00000478423 TRIM9Q9C026 710 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 AP5M1Q9H0R1 490 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 GOLGA8SH3BPF8 625 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 TLR3O15455 904 aaKnown RBP15.42■□□□□ 0.06
NPHP4-208ENST00000478423 HEXIM1O94992 359 aaKnown RBP15.42■□□□□ 0.06
NPHP4-208ENST00000478423 PDHBP11177 359 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 QARSP47897 775 aaKnown RBP15.42■□□□□ 0.06
NPHP4-208ENST00000478423 SMAP1Q8IYB5 467 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-208ENST00000478423 GRK7Q8WTQ7 553 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 ARHGEF28Q8N1W1 1705 aaKnown RBP15.42■□□□□ 0.06
NPHP4-208ENST00000478423 PGRMC1O00264 195 aaKnown RBP15.42■□□□□ 0.06
NPHP4-208ENST00000478423 CD58P19256 250 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 BFSP1Q12934 665 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 CEP55Q53EZ4 464 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 CAPN12Q6ZSI9 719 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 EXOC8Q8IYI6 725 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 XXYLT1Q8NBI6 393 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 CEP63Q96MT8 703 aa15.42■□□□□ 0.06
NPHP4-208ENST00000478423 TTC26A0AVF1 554 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 P4HBP07237 508 aaKnown RBP15.41■□□□□ 0.06
NPHP4-208ENST00000478423 ABCD1P33897 745 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 KIF22Q14807 665 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 KNOP1Q1ED39 458 aaKnown RBP15.41■□□□□ 0.06
NPHP4-208ENST00000478423 LGSNQ5TDP6 509 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 TOGARAM2Q6ZUX3 1019 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 FAM149B1Q96BN6 582 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 RPS6KC1Q96S38 1066 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 EPB41L5Q9HCM4 733 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 PALM3A6NDB9 673 aaPredicted RBP15.41■□□□□ 0.06
NPHP4-208ENST00000478423 SEC31AO94979 1220 aaKnown RBP15.41■□□□□ 0.06
NPHP4-208ENST00000478423 ATP1A2P50993 1020 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 CASP7P55210 303 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 IQCB1Q15051 598 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 SLC10A5Q5PT55 438 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 KCNB2Q92953 911 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 PDE11AQ9HCR9 933 aa15.41■□□□□ 0.06
NPHP4-208ENST00000478423 XPOTO43592 962 aaKnown RBP15.41■□□□□ 0.06
NPHP4-208ENST00000478423 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms