RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 USH1CQ9Y6N9 552 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 TTC26A0AVF1 554 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 CIB2O75838 187 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 GAP43P17677 238 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 RASSF7Q02833 373 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 ZKSCAN8Q15776 578 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 SH2D4BQ5SQS7 431 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 ARMC9Q7Z3E5 817 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 DAGLBQ8NCG7 672 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 TCP11Q8WWU5 503 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 FCER1AP12319 257 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 EIF4A3P38919 411 aaKnown RBP12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 ARHGAP44Q17R89 818 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 NYAP1Q6ZVC0 841 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 GBP7Q8N8V2 638 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 ZNF577Q9BSK1 485 aa12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P10-201ENST00000456932 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 K7ENM7 598 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 BCRP11274 1271 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 AOC3Q16853 763 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 LRRC23Q53EV4 343 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 ODR4Q5SWX8 454 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 WDR11Q9BZH6 1224 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 E9PMD0 336 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 F5H6K3 240 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 C21orf2O43822 256 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 LUC7L3O95232 432 aaKnown RBP12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 SMARCA1P28370 1054 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 GUCY2FP51841 1108 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 KLRC3Q07444 240 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 PEX26Q7Z412 305 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 KLHL7Q8IXQ5 586 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 PARD6BQ9BYG5 372 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 ZCCHC17Q9NP64 241 aaKnown RBP12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 TCHHQ07283 1943 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 CDC42EP5Q6NZY7 148 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 CCDC26Q8TAB7 109 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 MXD3Q9BW11 206 aa12.29□□□□□ -0.44
CSPG4P10-201ENST00000456932 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 GOLGA8KD6RF30 607 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 SMIM22K7EJ46 135 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 AFPP02771 609 aaKnown RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 COASYQ13057 564 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 NLRX1Q86UT6 975 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 SYCE1Q8N0S2 351 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 GUF1Q8N442 669 aaKnown RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 PHRF1Q9P1Y6 1649 aaKnown RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 POTECB2RU33 542 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 KIF11P52732 1056 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 HHIPL2Q6UWX4 724 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 WDR24Q96S15 920 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 CCDC151A5D8V7 595 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 PDIA5Q14554 519 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 PROM2Q8N271 834 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 CCDC63Q8NA47 563 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 FNBP1Q96RU3 617 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 IWS1Q96ST2 819 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 BHMT2Q9H2M3 363 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 ITIH6Q6UXX5 1313 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 ATP2A2P16615 1042 aaKnown RBP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 POLE2P56282 527 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 SESN3P58005 492 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 BIRC3Q13489 604 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 ANKRD40Q6AI12 368 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSPG4P10-201ENST00000456932 TRIM66O15016 1216 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 KRT5P13647 590 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 FXR1P51114 621 aaKnown RBP eCLIP12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 CCNA1P78396 465 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 COG7P83436 770 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 ARHGEF16Q5VV41 709 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 MIGA2Q7L4E1 593 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 VPS52Q8N1B4 723 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 KIFAP3Q92845 792 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 C7orf25Q9BPX7 421 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 PAGR1Q9BTK6 254 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 CTTNBP2NLQ9P2B4 639 aa12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 ABT1Q9ULW3 272 aaKnown RBP12.27□□□□□ -0.44
CSPG4P10-201ENST00000456932 ESYT2A0FGR8 921 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms