RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PSEN2P49810 448 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 CHMP4BP1P59074 171 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 GRIN1Q05586 938 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 MFSD10Q14728 455 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 SLC39A14Q15043 492 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 STK38Q15208 465 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 ARL6IP4Q66PJ3 421 aaKnown RBP14.65□□□□□ -0.06
VPS33A-202ENST00000451053 DTHD1Q6ZMT9 781 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 NECAB2Q7Z6G3 386 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 LINC00301Q8NCQ3 95 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 BANK1Q8NDB2 785 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 VTI1AQ96AJ9 217 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 GLT1D1Q96MS3 346 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 SMARCAD1Q9H4L7 1026 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 TUT1Q9H6E5 874 aaKnown RBP14.65□□□□□ -0.06
VPS33A-202ENST00000451053 AZI2Q9H6S1 392 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 STARD7Q9NQZ5 370 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 ZNF302Q9NR11 478 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 GABBR1Q9UBS5 961 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 SCN10AQ9Y5Y9 1956 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 IGSF9BQ9UPX0 1349 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
VPS33A-202ENST00000451053 PP2D1A8MPX8 630 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 MARK3P27448 753 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 STAT5BP51692 787 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 ATN1P54259 1190 aaPredicted RBP14.64□□□□□ -0.07
VPS33A-202ENST00000451053 EPHA7Q15375 998 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 KIAA0753Q2KHM9 967 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 NBPF20Q3BBV1 942 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 FAM160B1Q5W0V3 765 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 PDXDC2PQ6P474 469 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 IGSF22Q8N9C0 903 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 AFAP1L1Q8TED9 768 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 DYDC2Q96IM9 177 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 EIF2AK1Q9BQI3 630 aaKnown RBP14.64□□□□□ -0.07
VPS33A-202ENST00000451053 RGL1Q9NZL6 768 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 LRWD1Q9UFC0 647 aa14.64□□□□□ -0.07
VPS33A-202ENST00000451053 FBXO2Q9UK22 296 aaPredicted RBP14.64□□□□□ -0.07
VPS33A-202ENST00000451053 ZNF215Q9UL58 517 aaPredicted RBP14.64□□□□□ -0.07
VPS33A-202ENST00000451053 MAFBQ9Y5Q3 323 aaPredicted RBP14.64□□□□□ -0.07
VPS33A-202ENST00000451053 ZNF862O60290 1169 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 YEATS4O95619 227 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 ATP4AP20648 1035 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 MCM4P33991 863 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 CYP4A11Q02928 519 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 ITGA7Q13683 1181 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 PDIA5Q14554 519 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 PLCB4Q15147 1175 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 SLC39A5Q6ZMH5 540 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 PLPPR4Q7Z2D5 763 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 SLC43A3Q8NBI5 491 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 TMEM87AQ8NBN3 555 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 SPATA32Q96LK8 384 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 KATNAL1Q9BW62 490 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 RNPEPQ9H4A4 650 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 ERAP1Q9NZ08 941 aa14.63□□□□□ -0.07
VPS33A-202ENST00000451053 WRAP73Q9P2S5 460 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-202ENST00000451053 MORC2Q9Y6X9 1032 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-202ENST00000451053 WDR81Q562E7 1941 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 SPTLC2O15270 562 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 CAPN15O75808 1086 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 CDC25AP30304 524 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 PRKCEQ02156 737 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 CTTNQ14247 550 aaKnown RBP14.62□□□□□ -0.07
VPS33A-202ENST00000451053 LRRC26Q2I0M4 334 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 TRMT1LQ7Z2T5 733 aaKnown RBP14.62□□□□□ -0.07
VPS33A-202ENST00000451053 KCNG4Q8TDN1 519 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 ATP6V0A1Q93050 837 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 CLIC6Q96NY7 704 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 HSD17B14Q9BPX1 270 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 LXNQ9BS40 222 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 RAB34Q9BZG1 259 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 HDAC6Q9UBN7 1215 aa14.62□□□□□ -0.07
VPS33A-202ENST00000451053 SRPRBQ9Y5M8 271 aaKnown RBP14.62□□□□□ -0.07
VPS33A-202ENST00000451053 POTEB3A0JP26 581 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 ARVCFO00192 962 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 MED24O75448 989 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 SLITRK3O94933 977 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 STBD1O95210 358 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 P4HBP07237 508 aaKnown RBP14.61□□□□□ -0.07
VPS33A-202ENST00000451053 SPATA31C1P0DKV0 1188 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 SMIM10L2AP0DMW4 78 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 SMIM10L2BP0DMW5 78 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 QARSP47897 775 aaKnown RBP14.61□□□□□ -0.07
VPS33A-202ENST00000451053 SLC26A2P50443 739 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 CDK7P50613 346 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 PSMC5P62195 406 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 HIC1Q14526 733 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 SNX17Q15036 470 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 FAM47CQ5HY64 1035 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 POTEBQ6S5H4 581 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 TPH2Q8IWU9 490 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 KRI1Q8N9T8 703 aaKnown RBP14.61□□□□□ -0.07
VPS33A-202ENST00000451053 ERMNQ8TAM6 284 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 ATP8B4Q8TF62 1192 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 LEO1Q8WVC0 666 aaPredicted RBP14.61□□□□□ -0.07
VPS33A-202ENST00000451053 MMTAG2Q9BU76 263 aaKnown RBP14.61□□□□□ -0.07
VPS33A-202ENST00000451053 CSRNP2Q9H175 543 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 RCOR1Q9UKL0 485 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms