RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 EBAG9O00559 213 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 LRRN2O75325 713 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 EEF2P13639 858 aaKnown RBP20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 HNRNPH3P31942 346 aaKnown RBP20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 SHMT1P34896 483 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 SEPT2Q15019 361 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 TMEM119Q4V9L6 283 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 U2AF1L4Q8WU68 220 aaKnown RBP20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 RIC8AQ9NPQ8 531 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 CEP72Q9P209 647 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 AMACRQ9UHK6 382 aa20.8■□□□□ 0.92
PAXBP1-204ENST00000443785 AKAP3O75969 853 aa20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 ZNF211Q13398 564 aaPredicted RBP20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 RNF187Q5TA31 235 aaPredicted RBP20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 RBM46Q8TBY0 533 aaKnown RBP20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 KIAA1551Q9HCM1 1747 aa20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 ZBTB5O15062 677 aa20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 ZCWPW2Q504Y3 356 aa20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 ANO3Q9BYT9 981 aa20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 OSGEPQ9NPF4 335 aa20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 ROBO3Q96MS0 1386 aa20.79■□□□□ 0.92
PAXBP1-204ENST00000443785 CETN3O15182 167 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 TMOD1P28289 359 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 NMT1P30419 496 aaKnown RBP20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 CDC37Q16543 378 aaPredicted RBP20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 SLC18A3Q16572 532 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 ASPRV1Q53RT3 343 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 PLAAQ9Y263 795 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 DDX39AO00148 427 aaKnown RBP20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 ZNF76P36508 570 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 CDK17Q00537 523 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 RPS6KA1Q15418 735 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 ARHGAP44Q17R89 818 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 CDC42EP5Q6NZY7 148 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 TRIM59Q8IWR1 403 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 IFT20Q8IY31 132 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 UBLCP1Q8WVY7 318 aaPredicted RBP20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 NEUROG2Q9H2A3 272 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 GRIN2DO15399 1336 aa20.78■□□□□ 0.92
PAXBP1-204ENST00000443785 TMEM110-MUSTN1A8MSY1 372 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 PPFIA1Q13136 1202 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 AADACL2Q6P093 401 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 ZC3H12CQ9C0D7 883 aaKnown RBP20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 ARMCX3Q9UH62 379 aaPredicted RBP20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 NR2E1Q9Y466 385 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 FAM86B1E9PN63 330 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 FAM86B2P0C5J1 330 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 TRIM49P0CI25 452 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 TRIM49CP0CI26 452 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 CYP2J2P51589 502 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 CORO7P57737 925 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 ERVK-9P63128 1117 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 NAB2Q15742 525 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 ODF2Q5BJF6 829 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 ALKBH5Q6P6C2 394 aaKnown RBP20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 TPH2Q8IWU9 490 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 RUSC1Q9BVN2 902 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 STRCQ7RTU9 1775 aa20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 COL16A1Q07092 1604 aaPredicted RBP20.77■□□□□ 0.92
PAXBP1-204ENST00000443785 SHTN1A0MZ66 631 aa20.77■□□□□ 0.91
PAXBP1-204ENST00000443785 DDTLA6NHG4 134 aaPredicted RBP20.77■□□□□ 0.91
PAXBP1-204ENST00000443785 UCHL3P15374 230 aa20.77■□□□□ 0.91
PAXBP1-204ENST00000443785 PLCG2P16885 1265 aa20.77■□□□□ 0.91
PAXBP1-204ENST00000443785 PDIA5Q14554 519 aa20.77■□□□□ 0.91
PAXBP1-204ENST00000443785 KAT2BQ92831 832 aa20.77■□□□□ 0.91
PAXBP1-204ENST00000443785 EIF3HO15372 352 aaKnown RBP eCLIP20.76■□□□□ 0.918e-6■□□□□ 10.6
PAXBP1-204ENST00000443785 MAGEA9P43362 315 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 EXOC3L4Q17RC7 722 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 MSL1Q68DK7 614 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 BARGINQ6ZT62 677 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 DAAM2Q86T65 1068 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 ZNF622Q969S3 477 aaKnown RBP eCLIP20.76■□□□□ 0.912e-9■■■□□ 15.4
PAXBP1-204ENST00000443785 DHX36Q9H2U1 1008 aaKnown RBP20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 KCTD10Q9H3F6 313 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 DAPK3O43293 454 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 OPA1O60313 960 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 ATP2B4P23634 1241 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 HOXD13P35453 343 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 NBPF9Q3BBW0 867 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 SLFN13Q68D06 897 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 DNAJC18Q9H819 358 aa20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 COL14A1Q05707 1796 aaKnown RBP20.76■□□□□ 0.91
PAXBP1-204ENST00000443785 DCDC2CA8MYV0 355 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 ARHGAP4P98171 946 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 GLYCTKQ8IVS8 523 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 TRIM51Q9BSJ1 452 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 GCNT4Q9P109 453 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 EML1O00423 815 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 ZNF662Q6ZS27 426 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 GOPCQ9HD26 462 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 PCDHA2Q9Y5H9 948 aa20.75■□□□□ 0.91
PAXBP1-204ENST00000443785 MYO1FO00160 1098 aa20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 XRCC5P13010 732 aaKnown RBP20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 GYS1P13807 737 aa20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 DDR1Q08345 913 aa20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 METTL13Q8N6R0 699 aa20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 PIK3R5Q8WYR1 880 aa20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 TISP43B9A030 160 aa20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 E7EVH7 732 aa20.74■□□□□ 0.91
PAXBP1-204ENST00000443785 KRIT1O00522 736 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms