RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 GSTTP1A0A1W2PQM5 241 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 BACH1O14867 736 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 DYNC1LI2O43237 492 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 GJB1P08034 283 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 MAP2K2P36507 400 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 ARSHQ5FYA8 562 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 CCDC183Q5T5S1 534 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 CCDC62Q6P9F0 684 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 SLFN12Q8IYM2 578 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 PDLIM2Q96JY6 352 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 SPATA33Q96N06 139 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 DNAJC25Q9H1X3 360 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 GDAQ9Y2T3 454 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 SLC15A5A6NIM6 579 aa10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 TCF7P36402 384 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 LRRC41Q15345 812 aa10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 ANP32BQ92688 251 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 FAM20AQ96MK3 541 aa10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 IWS1Q96ST2 819 aa10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 TRIM17Q9Y577 477 aa10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 TRIP12Q14669 1992 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 SYNGAP1Q96PV0 1343 aa10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 EVPLQ92817 2033 aa10.65□□□□□ -0.7
HMGCLL1-206ENST00000428842 LAD1O00515 517 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 BMP15O95972 392 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 IDEP14735 1019 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 FCGRTP55899 365 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 CACNB2Q08289 660 aaPredicted RBP10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 DPYDQ12882 1025 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 PPP2R5CQ13362 524 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 POSTNQ15063 836 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 HS1BP3Q53T59 392 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 MOXD1Q6UVY6 613 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 ANO5Q75V66 913 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 DHX37Q8IY37 1157 aaKnown RBP10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 GPRASP2Q96D09 838 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 RNPEPQ9H4A4 650 aa10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 MAP3K20Q9NYL2 800 aaKnown RBP10.65□□□□□ -0.71
HMGCLL1-206ENST00000428842 SLFN14P0C7P3 912 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZNF865P0CJ78 1059 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 IGBP1P78318 339 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 ARHGAP1Q07960 439 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 DRP2Q13474 957 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 PDIA5Q14554 519 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 GNPTABQ3T906 1256 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 KLHL10Q6JEL2 608 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 CEP57L1Q8IYX8 460 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 TCEAL9Q9UHQ7 104 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 PTCH2Q9Y6C5 1203 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 PLA2G4BP0C869 781 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 STX17P56962 302 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 ANO6Q4KMQ2 910 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 IQUBQ8NA54 791 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 LARP4BQ92615 738 aaKnown RBP10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 DDX12PQ92771 950 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 CALML4Q96GE6 196 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 KIFC3Q9BVG8 833 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 CCSER1Q9C0I3 900 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
HMGCLL1-206ENST00000428842 FAM237AA0A1B0GTK4 181 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 TNRC18O15417 2968 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 USO1O60763 962 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 CSDE1O75534 798 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 ALDH1A1P00352 501 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 RPA1P27694 616 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 RGS2P41220 211 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 TYRO3Q06418 890 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 KCNA1Q09470 495 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 TMEM119Q4V9L6 283 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 CELF3Q5SZQ8 465 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 ABHD15Q6UXT9 468 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 LUZP1Q86V48 1076 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZSCAN30Q86W11 494 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 GPBP1Q86WP2 473 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 GTF3C2Q8WUA4 911 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 RAD54LQ92698 747 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 GLG1Q92896 1179 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 RIT2Q99578 217 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 GPR20Q99678 358 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 APBA2Q99767 749 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 SLC39A2Q9NP94 309 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 NOP56O00567 594 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 TBX3O15119 743 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 TXLNAP40222 546 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 CASP5P51878 434 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 PRKCEQ02156 737 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 TNFAIP2Q03169 654 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 MTFR1Q15390 333 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 MTERF2Q49AM1 385 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 ABRAQ8N0Z2 381 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 MED15Q96RN5 788 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms