RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MTG1Q9BT17 334 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-202ENST00000422991 RAB34Q9BZG1 259 aa19.11■□□□□ 0.65
COL7A1-202ENST00000422991 BACH1O14867 736 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 PPP6R2O75170 966 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 CABYRO75952 493 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 COL6A1P12109 1028 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 GRIN1Q05586 938 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 PDIA5Q14554 519 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 EPHA7Q15375 998 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 FAM160B1Q5W0V3 765 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 KCNG4Q8TDN1 519 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 LEO1Q8WVC0 666 aaPredicted RBP19.1■□□□□ 0.65
COL7A1-202ENST00000422991 SMARCAD1Q9H4L7 1026 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 AZI2Q9H6S1 392 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 LRWD1Q9UFC0 647 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 RCOR1Q9UKL0 485 aa19.1■□□□□ 0.65
COL7A1-202ENST00000422991 SRPRBQ9Y5M8 271 aaKnown RBP19.1■□□□□ 0.65
COL7A1-202ENST00000422991 UGCGQ16739 394 aa19.09■□□□□ 0.65
COL7A1-202ENST00000422991 SWSAP1Q6NVH7 229 aa19.09■□□□□ 0.65
COL7A1-202ENST00000422991 PLPPR4Q7Z2D5 763 aa19.09■□□□□ 0.65
COL7A1-202ENST00000422991 UBE2Q1Q7Z7E8 422 aa19.09■□□□□ 0.65
COL7A1-202ENST00000422991 KRI1Q8N9T8 703 aaKnown RBP19.09■□□□□ 0.65
COL7A1-202ENST00000422991 GLG1Q92896 1179 aa19.09■□□□□ 0.65
COL7A1-202ENST00000422991 TNPO1Q92973 898 aaKnown RBP19.09■□□□□ 0.65
COL7A1-202ENST00000422991 EIF2AK1Q9BQI3 630 aaKnown RBP19.09■□□□□ 0.65
COL7A1-202ENST00000422991 ZNF302Q9NR11 478 aa19.09■□□□□ 0.65
COL7A1-202ENST00000422991 GABBR1Q9UBS5 961 aa19.09■□□□□ 0.65
COL7A1-202ENST00000422991 ZNF215Q9UL58 517 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-202ENST00000422991 MAFBQ9Y5Q3 323 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-202ENST00000422991 PP2D1A8MPX8 630 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 H3BRB1 525 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 HAS3O00219 553 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 P4HBP07237 508 aaKnown RBP19.08■□□□□ 0.64
COL7A1-202ENST00000422991 LONP1P36776 959 aaKnown RBP19.08■□□□□ 0.64
COL7A1-202ENST00000422991 PSEN2P49810 448 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 STAT5BP51692 787 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 MFSD10Q14728 455 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 PDXDC2PQ6P474 469 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 BANK1Q8NDB2 785 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 NEK9Q8TD19 979 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 DYDC2Q96IM9 177 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 SPATA32Q96LK8 384 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 AK8Q96MA6 479 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 GLT1D1Q96MS3 346 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 HSD17B14Q9BPX1 270 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 KATNAL1Q9BW62 490 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 SCAND2PQ9GZW5 306 aaPredicted RBP19.08■□□□□ 0.64
COL7A1-202ENST00000422991 TUT1Q9H6E5 874 aaKnown RBP19.08■□□□□ 0.64
COL7A1-202ENST00000422991 ERAP1Q9NZ08 941 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 ARID2Q68CP9 1835 aa19.08■□□□□ 0.64
COL7A1-202ENST00000422991 ZNF862O60290 1169 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 SLC26A2P50443 739 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 PSMC6P62333 389 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 KIAA0753Q2KHM9 967 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 ERMNQ8TAM6 284 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 ATP6V0A1Q93050 837 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 PAWRQ96IZ0 340 aaKnown RBP19.07■□□□□ 0.64
COL7A1-202ENST00000422991 CLIC6Q96NY7 704 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 LXNQ9BS40 222 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 CSRNP2Q9H175 543 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 RGL1Q9NZL6 768 aa19.07■□□□□ 0.64
COL7A1-202ENST00000422991 GRIN2DO15399 1336 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 MED24O75448 989 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 ATP4AP20648 1035 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 MARK3P27448 753 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 QARSP47897 775 aaKnown RBP19.06■□□□□ 0.64
COL7A1-202ENST00000422991 PSMC5P62195 406 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 PRKCEQ02156 737 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 CYP4A11Q02928 519 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 HAUS3Q68CZ6 603 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 MMTAG2Q9BU76 263 aaKnown RBP19.06■□□□□ 0.64
COL7A1-202ENST00000422991 POLR3CQ9BUI4 534 aaPredicted RBP19.06■□□□□ 0.64
COL7A1-202ENST00000422991 C11orf49Q9H6J7 331 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 TUFT1Q9NNX1 390 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 STARD7Q9NQZ5 370 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 WRAP73Q9P2S5 460 aaPredicted RBP19.06■□□□□ 0.64
COL7A1-202ENST00000422991 STK24Q9Y6E0 443 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 LOXHD1Q8IVV2 1947 aa19.06■□□□□ 0.64
COL7A1-202ENST00000422991 A0A0U1RQG5 324 aaPredicted RBP19.05■□□□□ 0.64
COL7A1-202ENST00000422991 CUTAO60888 179 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 SLITRK3O94933 977 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 SPATA31C1P0DKV0 1188 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 RPA1P27694 616 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 CDC25AP30304 524 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 ME1P48163 572 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 CTTNQ14247 550 aaKnown RBP19.05■□□□□ 0.64
COL7A1-202ENST00000422991 PLCB4Q15147 1175 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 NBPF20Q3BBV1 942 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 AXDND1Q5T1B0 1012 aaPredicted RBP19.05■□□□□ 0.64
COL7A1-202ENST00000422991 KRT79Q5XKE5 535 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 NECAB2Q7Z6G3 386 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 SNX29Q8TEQ0 813 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 VTI1AQ96AJ9 217 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 HTATIP2Q9BUP3 242 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 SENP6Q9GZR1 1112 aaPredicted RBP19.05■□□□□ 0.64
COL7A1-202ENST00000422991 RNPEPQ9H4A4 650 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 GDPD2Q9HCC8 539 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 PCDHA7Q9UN72 937 aa19.05■□□□□ 0.64
COL7A1-202ENST00000422991 ALPK3Q96L96 1907 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 POTEB3A0JP26 581 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms