RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PPP4R3CPQ6ZMV5 832 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 IFT20Q8IY31 132 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 DBNDD1Q9H9R9 158 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 QSER1Q2KHR3 1735 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 STAT3P40763 770 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 USP11P51784 963 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 SLC12A3P55017 1021 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 ASIC2Q16515 512 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 KIAA0753Q2KHM9 967 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 CNKSR1Q969H4 720 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 PACSIN1Q9BY11 444 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 ANO3Q9BYT9 981 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 GLT8D2Q9H1C3 349 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 ADAMTS1Q9UHI8 967 aa28.1■■■□□ 2.09
COL13A1-203ENST00000398969 GRID2IPA4D2P6 1211 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 HSF2BPO75031 334 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 KRT18P05783 430 aaKnown RBP28.09■■■□□ 2.09
COL13A1-203ENST00000398969 EPS15P42566 896 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 DNA2P51530 1060 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 IRAK1P51617 712 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 KCNH2Q12809 1159 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 QRICH1Q2TAL8 776 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 PITPNM2Q9BZ72 1349 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 CYP3A7-CYP3A51PA0A087WV96 503 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 CETN3O15182 167 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 CYP3A7P24462 503 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 MBOAT7Q96N66 472 aa28.09■■■□□ 2.09
COL13A1-203ENST00000398969 DHX36Q9H2U1 1008 aaKnown RBP28.09■■■□□ 2.09
COL13A1-203ENST00000398969 ZNF219Q9P2Y4 722 aaPredicted RBP28.09■■■□□ 2.09
COL13A1-203ENST00000398969 POTEFA5A3E0 1075 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 POTEIP0CG38 1075 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 ENOX2Q16206 610 aaKnown RBP28.08■■■□□ 2.09
COL13A1-203ENST00000398969 POTEGQ6S5H5 508 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 POTEEQ6S8J3 1075 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 GBP6Q6ZN66 633 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 INPP4AQ96PE3 977 aaPredicted RBP28.08■■■□□ 2.09
COL13A1-203ENST00000398969 ZHX3Q9H4I2 956 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 KCNQ5Q9NR82 932 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 HEXIM1O94992 359 aaKnown RBP28.08■■■□□ 2.09
COL13A1-203ENST00000398969 NR2F2P24468 414 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 RUFY1Q96T51 708 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 CAPS2Q9BXY5 557 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 PACSIN2Q9UNF0 486 aaPredicted RBP28.08■■■□□ 2.09
COL13A1-203ENST00000398969 PCDHA1Q9Y5I3 950 aa28.08■■■□□ 2.09
COL13A1-203ENST00000398969 CARSP49589 748 aaKnown RBP28.07■■■□□ 2.08
COL13A1-203ENST00000398969 SCNN1DP51172 638 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 CASP5P51878 434 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 TTMPQ5BVD1 217 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 SLFN12Q8IYM2 578 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 ARL8AQ96BM9 186 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 ZSCAN5CA6NGD5 496 aaPredicted RBP28.07■■■□□ 2.08
COL13A1-203ENST00000398969 HLA-DOAP06340 250 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 SLURP2P0DP57 97 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 CDC42EP5Q6NZY7 148 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 C7orf43Q8WVR3 580 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 PDGFDQ9GZP0 370 aaPredicted RBP28.07■■■□□ 2.08
COL13A1-203ENST00000398969 EPB41L5Q9HCM4 733 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 HDAC9Q9UKV0 1011 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 NFU1Q9UMS0 254 aa28.07■■■□□ 2.08
COL13A1-203ENST00000398969 CORO7P57737 925 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 GUCY2DQ02846 1103 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 DPY19L2P1Q6NXN4 242 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 HHIPL2Q6UWX4 724 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 ZIM3Q96PE6 472 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 ESYT3A0FGR9 886 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 SPIRE1Q08AE8 756 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 PAK2Q13177 524 aa28.06■■■□□ 2.08
COL13A1-203ENST00000398969 DNAJC21Q5F1R6 531 aaKnown RBP28.06■■■□□ 2.08
COL13A1-203ENST00000398969 ADAMTSL1Q8N6G6 1762 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 FAM153BP0C7A2 387 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 ACTN1P12814 892 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 FAM153CQ494X1 144 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 MOXD1Q6UVY6 613 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 CATSPER3Q86XQ3 398 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 KRT12Q99456 494 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 FAM153AQ9UHL3 310 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 TRAF3IP3Q9Y228 551 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 GRIN2DO15399 1336 aa28.05■■■□□ 2.08
COL13A1-203ENST00000398969 BTNL10A8MVZ5 291 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 PTK2Q05397 1052 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 GIT2Q14161 759 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 TEKT1Q969V4 418 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 PLCB1Q9NQ66 1216 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 MAGEA9P43362 315 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 CDC37Q16543 378 aaPredicted RBP28.04■■■□□ 2.08
COL13A1-203ENST00000398969 IRF2BP2Q7Z5L9 587 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 FRMD5Q7Z6J6 570 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 ETNPPLQ8TBG4 499 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 CRYGNQ8WXF5 182 aa28.04■■■□□ 2.08
COL13A1-203ENST00000398969 MEIS2O14770 477 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 EIF3HO15372 352 aaKnown RBP eCLIP28.03■■■□□ 2.08
COL13A1-203ENST00000398969 RAD21O60216 631 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 SLC9A1P19634 815 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 PSMC6P62333 389 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 IFT81Q8WYA0 676 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 CCDC17Q96LX7 622 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 EHD4Q9H223 541 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 ARMCX3Q9UH62 379 aaPredicted RBP28.03■■■□□ 2.08
COL13A1-203ENST00000398969 ECE2O60344 883 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 BAG6P46379 1132 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms