RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 DLK2Q6UY11 383 aa10□□□□□ -0.81
TPM3-213ENST00000368545 RPUSD2Q8IZ73 545 aaKnown RBP10□□□□□ -0.81
TPM3-213ENST00000368545 ANAPC16Q96DE5 110 aa10□□□□□ -0.81
TPM3-213ENST00000368545 CHAMP1Q96JM3 812 aa10□□□□□ -0.81
TPM3-213ENST00000368545 ZNF396Q96N95 335 aaPredicted RBP10□□□□□ -0.81
TPM3-213ENST00000368545 GUCD1Q96NT3 240 aa10□□□□□ -0.81
TPM3-213ENST00000368545 TDRD3Q9H7E2 651 aaKnown RBP10□□□□□ -0.81
TPM3-213ENST00000368545 STRIP2Q9ULQ0 834 aa10□□□□□ -0.81
TPM3-213ENST00000368545 PCDHAC2Q9Y5I4 1007 aa10□□□□□ -0.81
TPM3-213ENST00000368545 WNT7AO00755 349 aa10□□□□□ -0.81
TPM3-213ENST00000368545 PRPF3O43395 683 aaKnown RBP10□□□□□ -0.81
TPM3-213ENST00000368545 DNAJC6O75061 913 aa10□□□□□ -0.81
TPM3-213ENST00000368545 PPFIA3O75145 1194 aa10□□□□□ -0.81
TPM3-213ENST00000368545 FBXO24O75426 580 aa10□□□□□ -0.81
TPM3-213ENST00000368545 TOP1P11387 765 aaKnown RBP10□□□□□ -0.81
TPM3-213ENST00000368545 GRM4Q14833 912 aa10□□□□□ -0.81
TPM3-213ENST00000368545 FOXP4Q8IVH2 680 aaPredicted RBP10□□□□□ -0.81
TPM3-213ENST00000368545 PRMT6Q96LA8 375 aaPredicted RBP10□□□□□ -0.81
TPM3-213ENST00000368545 TMEM47Q9BQJ4 181 aa10□□□□□ -0.81
TPM3-213ENST00000368545 LZTS2Q9BRK4 669 aa10□□□□□ -0.81
TPM3-213ENST00000368545 SPC25Q9HBM1 224 aa10□□□□□ -0.81
TPM3-213ENST00000368545 LATS2Q9NRM7 1088 aa10□□□□□ -0.81
TPM3-213ENST00000368545 ZDHHC3Q9NYG2 299 aa10□□□□□ -0.81
TPM3-213ENST00000368545 CNTNAP5Q8WYK1 1306 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 SHMT1P34896 483 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 PHKA2P46019 1235 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 CACNB3P54284 484 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 GUCY1B3Q02153 619 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 TCP10Q12799 353 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 SAFBQ15424 915 aaKnown RBP eCLIP9.99□□□□□ -0.81
TPM3-213ENST00000368545 KRT40Q6A162 431 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 SYAP1Q96A49 352 aaPredicted RBP9.99□□□□□ -0.81
TPM3-213ENST00000368545 EMID1Q96A84 441 aaPredicted RBP9.99□□□□□ -0.81
TPM3-213ENST00000368545 CEP95Q96GE4 821 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 NT5C1AQ9BXI3 368 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 MTMR4Q9NYA4 1195 aa9.99□□□□□ -0.81
TPM3-213ENST00000368545 IGKV6D-41A0A0C4DH26 115 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 DDTLA6NHG4 134 aaPredicted RBP9.98□□□□□ -0.81
TPM3-213ENST00000368545 PLEKHA8P1O95397 391 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 TTLL1O95922 423 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 TFRCP02786 760 aaKnown RBP9.98□□□□□ -0.81
TPM3-213ENST00000368545 FCGRTP55899 365 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 KCNC4Q03721 635 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 FAM160A1Q05DH4 1040 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 TNFAIP1Q13829 316 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 Q7L0L9 218 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 KLF16Q9BXK1 252 aaPredicted RBP9.98□□□□□ -0.81
TPM3-213ENST00000368545 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 UBP1Q9NZI7 540 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 ZNF70Q9UC06 446 aaPredicted RBP9.98□□□□□ -0.81
TPM3-213ENST00000368545 HERC5Q9UII4 1024 aaKnown RBP9.98□□□□□ -0.81
TPM3-213ENST00000368545 TRIOBPQ9H2D6 2365 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 MMP1P03956 469 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 AKR1B1P15121 316 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 CHMP4BP1P59074 171 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
TPM3-213ENST00000368545 FAM83AQ86UY5 434 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 GPT2Q8TD30 523 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 CPLX3Q8WVH0 158 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 FAM151AQ8WW52 585 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 RHOVQ96L33 236 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 AIFM3Q96NN9 605 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 FANCLQ9NW38 375 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 ABI2Q9NYB9 513 aaPredicted RBP9.98□□□□□ -0.81
TPM3-213ENST00000368545 PRKAG3Q9UGI9 489 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 TLR6Q9Y2C9 796 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 MYPNQ86TC9 1320 aa9.98□□□□□ -0.81
TPM3-213ENST00000368545 ZIC2O95409 532 aaPredicted RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 U2AF2P26368 475 aaKnown RBP eCLIP9.97□□□□□ -0.815e-7■■■■□ 22.9
TPM3-213ENST00000368545 SMARCA1P28370 1054 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 CERKLQ49MI3 558 aaPredicted RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 KIAA0319Q5VV43 1072 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 TATDN1Q6P1N9 297 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 FAM173BQ6P4H8 233 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 ZFPM1Q8IX07 1006 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 LEO1Q8WVC0 666 aaPredicted RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 ZBED3Q96IU2 234 aaPredicted RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 DNAJC18Q9H819 358 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 ISY1Q9ULR0 285 aaKnown RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 WNT10BO00744 389 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 XYLBO75191 536 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 PARP1P09874 1014 aaKnown RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 GUCY1A2P33402 732 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 MAGEA10P43363 369 aaPredicted RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 CAVIN1Q6NZI2 390 aaKnown RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 SPZ1Q9BXG8 430 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 FOXP1Q9H334 677 aaPredicted RBP9.97□□□□□ -0.81
TPM3-213ENST00000368545 BRMS1Q9HCU9 246 aa9.97□□□□□ -0.81
TPM3-213ENST00000368545 CCL15-CCL14A0A0B4J2E2 113 aa9.96□□□□□ -0.82
TPM3-213ENST00000368545 A0A1W2PP55 124 aa9.96□□□□□ -0.82
TPM3-213ENST00000368545 GOLGA6L4A6NEF3 574 aa9.96□□□□□ -0.82
TPM3-213ENST00000368545 TCP10L2B9ZVM9 353 aa9.96□□□□□ -0.82
TPM3-213ENST00000368545 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
TPM3-213ENST00000368545 YEATS4O95619 227 aa9.96□□□□□ -0.82
TPM3-213ENST00000368545 GARTP22102 1010 aa9.96□□□□□ -0.82
TPM3-213ENST00000368545 PKN1Q16512 942 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms