RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 RRN3P2A6NIE6 340 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 ZBTB43O43298 467 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 FOSP01100 380 aaPredicted RBP18.32■□□□□ 0.52
CKS1B-202ENST00000368436 RPLP2P05387 115 aaKnown RBP18.32■□□□□ 0.52
CKS1B-202ENST00000368436 GHRP10912 638 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 NAPAP54920 295 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 GPM6BQ13491 265 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 RTN1Q16799 776 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 LEXMQ3ZCV2 418 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 FBXO47Q5MNV8 452 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 CYP2W1Q8TAV3 490 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 IL17RAQ96F46 866 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 C1QTNF1Q9BXJ1 281 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 SLC9A2Q9UBY0 812 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 hCG_1984214I3L0E3 225 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 ENPP3O14638 875 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 INSRRP14616 1297 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 ADCK5Q3MIX3 580 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 CENPQQ7L2Z9 268 aaPredicted RBP18.31■□□□□ 0.52
CKS1B-202ENST00000368436 PLPPR4Q7Z2D5 763 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 SKAP1Q86WV1 359 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 ZNF713Q8N859 430 aaPredicted RBP18.31■□□□□ 0.52
CKS1B-202ENST00000368436 TCEANC2Q96MN5 208 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 RC3H2Q9HBD1 1191 aaKnown RBP18.31■□□□□ 0.52
CKS1B-202ENST00000368436 FAM217BQ9NTX9 383 aaPredicted RBP18.31■□□□□ 0.52
CKS1B-202ENST00000368436 CDY2AQ9Y6F7 541 aa18.31■□□□□ 0.52
CKS1B-202ENST00000368436 V9GY48 417 aaPredicted RBP18.31■□□□□ 0.52
CKS1B-202ENST00000368436 STXBP3O00186 592 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 LINC00271P0C7V0 271 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 ARP10275 920 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
CKS1B-202ENST00000368436 ADCY7P51828 1080 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 ACTR2P61160 394 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 MRPS6P82932 125 aaKnown RBP18.3■□□□□ 0.52
CKS1B-202ENST00000368436 CEP55Q53EZ4 464 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 TSHZ1Q6ZSZ6 1077 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 FIBCD1Q8N539 461 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.3■□□□□ 0.52
CKS1B-202ENST00000368436 TNPO1Q92973 898 aaKnown RBP18.3■□□□□ 0.52
CKS1B-202ENST00000368436 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 SDF4Q9BRK5 362 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 AGO4Q9HCK5 861 aaKnown RBP18.3■□□□□ 0.52
CKS1B-202ENST00000368436 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 SQORQ9Y6N5 450 aa18.3■□□□□ 0.52
CKS1B-202ENST00000368436 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 C5orf67F2Z3F1 127 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 MEIS1O00470 390 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 ATG7O95352 703 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 RB1P06400 928 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 CDC27P30260 824 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 SREBF1P36956 1147 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 RCAN1P53805 252 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 IGBP1P78318 339 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 ITGB3BPQ13352 177 aaPredicted RBP18.29■□□□□ 0.52
CKS1B-202ENST00000368436 KRT32Q14532 448 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 COL19A1Q14993 1142 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 PLCB4Q15147 1175 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 TIGD5Q53EQ6 642 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 ZNF689Q96CS4 500 aaPredicted RBP18.29■□□□□ 0.52
CKS1B-202ENST00000368436 ZBTB10Q96DT7 871 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 ANO3Q9BYT9 981 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 GLT8D2Q9H1C3 349 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 AGO3Q9H9G7 860 aaKnown RBP18.29■□□□□ 0.52
CKS1B-202ENST00000368436 PCDHA2Q9Y5H9 948 aa18.29■□□□□ 0.52
CKS1B-202ENST00000368436 IGKV6D-21A0A0A0MT36 114 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 KLF18A0A0U1RQI7 1052 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 KCNA5P22460 613 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 STAT5BP51692 787 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 AP3B2Q13367 1082 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 IER5Q5VY09 327 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 NIPA1Q7RTP0 329 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 NEK9Q8TD19 979 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 CLP1Q92989 425 aaKnown RBP18.28■□□□□ 0.52
CKS1B-202ENST00000368436 FAM49AQ9H0Q0 323 aaPredicted RBP18.28■□□□□ 0.52
CKS1B-202ENST00000368436 CD320Q9NPF0 282 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 TMEM260Q9NX78 707 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 RAPGEFL1Q9UHV5 662 aa18.28■□□□□ 0.52
CKS1B-202ENST00000368436 ADGRA3Q8IWK6 1321 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 GOLGA8AA7E2F4 631 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 GOLGA8BA8MQT2 603 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 CDC45O75419 566 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 HMGB1P09429 215 aaKnown RBP18.27■□□□□ 0.52
CKS1B-202ENST00000368436 BMPR1AP36894 532 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 SLC26A2P50443 739 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 TCEAL5Q5H9L2 206 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 RTN4RL1Q86UN2 441 aaPredicted RBP18.27■□□□□ 0.52
CKS1B-202ENST00000368436 CRIPAKQ8N1N5 446 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 LINC01599Q8WXQ3 324 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 KHSRPQ92945 711 aaKnown RBP eCLIP18.27■□□□□ 0.52
CKS1B-202ENST00000368436 KCNB2Q92953 911 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 NSUN3Q9H649 340 aaKnown RBP18.27■□□□□ 0.52
CKS1B-202ENST00000368436 TRPC6Q9Y210 931 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 RWDD3Q9Y3V2 267 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 TRPV2Q9Y5S1 764 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 KIAA1671Q9BY89 1806 aa18.27■□□□□ 0.52
CKS1B-202ENST00000368436 DGKIO75912 1065 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms