RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CASP14P31944 242 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 XRRA1Q6P2D8 792 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 LRRC55Q6ZSA7 311 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 NELFCDQ8IXH7 590 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 ZNF507Q8TCN5 953 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 ZC3H4Q9UPT8 1303 aaKnown RBP28.48■■■□□ 2.15
CLK2-201ENST00000355560 MFAP3LO75121 409 aa28.47■■■□□ 2.15
CLK2-201ENST00000355560 NR3C2P08235 984 aa28.47■■■□□ 2.15
CLK2-201ENST00000355560 NSUN6Q8TEA1 469 aaKnown RBP28.47■■■□□ 2.15
CLK2-201ENST00000355560 SAMM50Q9Y512 469 aa28.47■■■□□ 2.15
CLK2-201ENST00000355560 A0A0G2JMZ2 1700 aa28.47■■■□□ 2.15
CLK2-201ENST00000355560 LOXHD1Q8IVV2 1947 aa28.47■■■□□ 2.15
CLK2-201ENST00000355560 A0A0G2JLL6 359 aaPredicted RBP28.46■■■□□ 2.15
CLK2-201ENST00000355560 ARHGAP6O43182 974 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 STX10O60499 249 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 TPM1P09493 284 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 PRRT2Q7Z6L0 340 aaPredicted RBP28.46■■■□□ 2.15
CLK2-201ENST00000355560 VSIG10LQ86VR7 867 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 PANX2Q96RD6 677 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 NOC4LQ9BVI4 516 aaKnown RBP28.46■■■□□ 2.15
CLK2-201ENST00000355560 SCN4AP35499 1836 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 SPDYE5A6NIY4 337 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 DNM2P50570 870 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 FXR1P51114 621 aaKnown RBP eCLIP28.46■■■□□ 2.15
CLK2-201ENST00000355560 CASP5P51878 434 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 TRIM14Q14142 442 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 LBX2Q6XYB7 198 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 C1orf186Q6ZWK4 172 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 CNGA4Q8IV77 575 aa28.46■■■□□ 2.15
CLK2-201ENST00000355560 PROCA1Q8NCQ7 364 aaPredicted RBP28.46■■■□□ 2.15
CLK2-201ENST00000355560 A0A1W2PQC6 194 aa28.45■■■□□ 2.15
CLK2-201ENST00000355560 TAF1DQ9H5J8 278 aaPredicted RBP28.45■■■□□ 2.15
CLK2-201ENST00000355560 COL4A3BPQ9Y5P4 624 aa28.45■■■□□ 2.15
CLK2-201ENST00000355560 NKRFO15226 690 aaKnown RBP eCLIP28.45■■■□□ 2.14
CLK2-201ENST00000355560 ATP9AO75110 1047 aa28.45■■■□□ 2.14
CLK2-201ENST00000355560 P4HBP07237 508 aaKnown RBP28.45■■■□□ 2.14
CLK2-201ENST00000355560 MIIPQ5JXC2 388 aa28.45■■■□□ 2.14
CLK2-201ENST00000355560 POLD4Q9HCU8 107 aa28.45■■■□□ 2.14
CLK2-201ENST00000355560 FKBP3Q00688 224 aaKnown RBP28.44■■■□□ 2.14
CLK2-201ENST00000355560 KCTD10Q9H3F6 313 aa28.44■■■□□ 2.14
CLK2-201ENST00000355560 IQCA1LA6NCM1 817 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 PEX10O60683 326 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 ZSWIM4Q9H7M6 989 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 LCTP09848 1927 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 TRAF5O00463 557 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 TNNT1P13805 278 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 CHST13Q8NET6 341 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 GPRASP2Q96D09 838 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 PPP1R13BQ96KQ4 1090 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 MRPL44Q9H9J2 332 aaKnown RBP28.43■■■□□ 2.14
CLK2-201ENST00000355560 BTBD7Q9P203 1132 aa28.43■■■□□ 2.14
CLK2-201ENST00000355560 KIAA1217Q5T5P2 1943 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 CXCL11O14625 94 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 FAM13AO94988 1023 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 IRX3P78415 501 aaPredicted RBP28.42■■■□□ 2.14
CLK2-201ENST00000355560 INPP4AQ96PE3 977 aaPredicted RBP28.42■■■□□ 2.14
CLK2-201ENST00000355560 MAF1Q9H063 256 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 BCAS3Q9H6U6 928 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 KCND2Q9NZV8 630 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 GAP43P17677 238 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 TBC1D8BQ0IIM8 1120 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 NYAP1Q6ZVC0 841 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 EPM2AIP1Q7L775 607 aaPredicted RBP28.42■■■□□ 2.14
CLK2-201ENST00000355560 NLRX1Q86UT6 975 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 OLFML3Q9NRN5 406 aa28.42■■■□□ 2.14
CLK2-201ENST00000355560 ARHGEF35A5YM69 484 aa28.41■■■□□ 2.14
CLK2-201ENST00000355560 SFI1A8K8P3 1242 aa28.41■■■□□ 2.14
CLK2-201ENST00000355560 MYBP10242 640 aa28.41■■■□□ 2.14
CLK2-201ENST00000355560 CCDC51Q96ER9 411 aa28.41■■■□□ 2.14
CLK2-201ENST00000355560 TCEAL9Q9UHQ7 104 aa28.41■■■□□ 2.14
CLK2-201ENST00000355560 KCNH4Q9UQ05 1017 aa28.41■■■□□ 2.14
CLK2-201ENST00000355560 QARSP47897 775 aaKnown RBP28.4■■■□□ 2.14
CLK2-201ENST00000355560 KRT76Q01546 638 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 PPIL2Q13356 520 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 PTPN14Q15678 1187 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 GCNT3O95395 438 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 MAN2A1Q16706 1144 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 PPP4R3CPQ6ZMV5 832 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 ARMC9Q7Z3E5 817 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 OPTNQ96CV9 577 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 NAA15Q9BXJ9 866 aaKnown RBP28.4■■■□□ 2.14
CLK2-201ENST00000355560 PARVGQ9HBI0 331 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 ABHD10Q9NUJ1 306 aa28.4■■■□□ 2.14
CLK2-201ENST00000355560 WDR64B1ANS9 1081 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 RNF225M0QZC1 329 aaPredicted RBP28.39■■■□□ 2.14
CLK2-201ENST00000355560 MAFGO15525 162 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 RGS20O76081 388 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 CCNE2O96020 404 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 ERCC3P19447 782 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 JAK3P52333 1124 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 KNOP1Q1ED39 458 aaKnown RBP28.39■■■□□ 2.14
CLK2-201ENST00000355560 VWA3BQ502W6 1294 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 FKBP15Q5T1M5 1219 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 RIOX2Q8IUF8 465 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 ANKRD35Q8N283 1001 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 MYCT1Q8N699 235 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 CEP63Q96MT8 703 aa28.39■■■□□ 2.14
CLK2-201ENST00000355560 CCP110O43303 1012 aa28.39■■■□□ 2.13
CLK2-201ENST00000355560 GRIN3BO60391 1043 aa28.39■■■□□ 2.13
CLK2-201ENST00000355560 PRPF6O94906 941 aaKnown RBP28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms