RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 ROBO1Q9Y6N7 1651 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 B2RBV5 119 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 STK10O94804 968 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 GJB6O95452 261 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 CAPNS1P04632 268 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 ZGLP1P0C6A0 271 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 ZSCAN22P10073 491 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 SDSP20132 328 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 GDNFP39905 211 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 ZNF75DP51815 510 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 GTF2A1P52655 376 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 DHX8Q14562 1220 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 NFE2L2Q16236 605 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 DDR2Q16832 855 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 RPAP2Q8IXW5 612 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 IP6K1Q92551 441 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 BRF1Q92994 677 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 SECISBP2LQ93073 1101 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 ZNF622Q969S3 477 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 MYCBPQ99417 103 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 KCND1Q9NSA2 647 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 TMEM59LQ9UK28 342 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 SIPA1L3O60292 1781 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 PKD1L3Q7Z443 1732 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 CPDO75976 1380 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 MYH15Q9Y2K3 1946 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 SPATA31A3Q5VYP0 1347 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 SMARCA5O60264 1052 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 TPM1P09493 284 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 VAV1P15498 845 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 HOXC9P31274 260 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 PRKAR2BP31323 418 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 CASQ1P31415 396 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 NOP2P46087 812 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 AMPHP49418 695 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 PCBP3P57721 371 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 LMOD3Q0VAK6 560 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 SERINC3Q13530 473 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 PTPN14Q15678 1187 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 HSP90AB2PQ58FF8 381 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 ICE2Q659A1 982 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 LARP1BQ659C4 914 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 ZSCAN25Q6NSZ9 544 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 FBXO38Q6PIJ6 1188 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 BRINP3Q76B58 766 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 CCDC186Q7Z3E2 898 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 FILIP1Q7Z7B0 1213 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 ATG4DQ86TL0 474 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 SIRT2Q8IXJ6 389 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 FIBCD1Q8N539 461 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 ANKRD44Q8N8A2 993 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 SLC12A9Q9BXP2 914 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 FOXP3Q9BZS1 431 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 ADAMTS10Q9H324 1103 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 APEX2Q9UBZ4 518 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 RSPH14Q9UHP6 348 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 SCN11AQ9UI33 1791 aa8.88□□□□□ -0.99
UBE2D3-204ENST00000349311 H0Y8X5 98 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 AP5Z1O43299 807 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 GCP02774 474 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 H2AFXP16104 143 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 RBM6P78332 1123 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 RTP2Q5QGT7 225 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 CRTC3Q6UUV7 619 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 PLA2G4DQ86XP0 818 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 TDRD7Q8NHU6 1098 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 CCDC120Q96HB5 630 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 CHAMP1Q96JM3 812 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 FGD4Q96M96 766 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 GBP3Q9H0R5 595 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 RC3H2Q9HBD1 1191 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 ZNF215Q9UL58 517 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 CNPY2Q9Y2B0 182 aa8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 PARP4Q9UKK3 1724 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-204ENST00000349311 KDM3BQ7LBC6 1761 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 A0A1B0GUL7 405 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 SUSD5O60279 629 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 SYPP08247 313 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 NOL9Q5SY16 702 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 GIMAP6Q6P9H5 292 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 CKAP2LQ8IYA6 745 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 IQUBQ8NA54 791 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 DHX38Q92620 1227 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 MRGPRX3Q96LB0 322 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 APBA2Q99767 749 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 NCAPGQ9BPX3 1015 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 NUP62CLQ9H1M0 184 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 PSD3Q9NYI0 1048 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 SLAMF8Q9P0V8 285 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 EMC9Q9Y3B6 208 aa8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 N4BP2Q86UW6 1770 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-204ENST00000349311 PTPRCP08575 1304 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 WNK3Q9BYP7 1800 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 STX6O43752 255 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 DHX16O60231 1041 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 HMMRO75330 724 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 PPM1BO75688 479 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 DDAH1O94760 285 aa8.85□□□□□ -0.99
UBE2D3-204ENST00000349311 PAPLNO95428 1278 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms