RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 TSG101Q99816 390 aa13.25□□□□□ -0.29
NCL-201ENST00000322723 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
NCL-201ENST00000322723 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
NCL-201ENST00000322723 PLCB1Q9NQ66 1216 aa13.25□□□□□ -0.29
NCL-201ENST00000322723 AIPL1Q9NZN9 384 aa13.25□□□□□ -0.29
NCL-201ENST00000322723 OTOFQ9HC10 1997 aa13.25□□□□□ -0.29
NCL-201ENST00000322723 POTEFA5A3E0 1075 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 EML1O00423 815 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.291e-7■□□□□ 8.1
NCL-201ENST00000322723 SLC16A3O15427 465 aaKnown RBP13.24□□□□□ -0.29
NCL-201ENST00000322723 SASH3O75995 380 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 CASP5P51878 434 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 CHMP4BP1P59074 171 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 POTEEQ6S8J3 1075 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 FRMD5Q7Z6J6 570 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 SAMD3Q8N6K7 520 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 GIMAP7Q8NHV1 300 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 TEPSINQ96N21 525 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
NCL-201ENST00000322723 ARHGEF10LQ9HCE6 1279 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 GOPCQ9HD26 462 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 ZNFX1Q9P2E3 1918 aaKnown RBP13.24□□□□□ -0.29
NCL-201ENST00000322723 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 CAP2P40123 477 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 C1orf186Q6ZWK4 172 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 FUT8Q9BYC5 575 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 NUCKS1Q9H1E3 243 aaKnown RBP13.24□□□□□ -0.29
NCL-201ENST00000322723 STK32BQ9NY57 414 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 MYO6Q9UM54 1294 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 KIAA1217Q5T5P2 1943 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 PDXKO00764 312 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
NCL-201ENST00000322723 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 MYO1CO00159 1063 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 MEIS1O00470 390 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 C21orf2O43822 256 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
NCL-201ENST00000322723 PPP1R37O75864 691 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
NCL-201ENST00000322723 LRRC41Q15345 812 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 EIF2AK1Q9BQI3 630 aaKnown RBP13.23□□□□□ -0.29
NCL-201ENST00000322723 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 ERMNQ8TAM6 284 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 SLC16A10Q8TF71 515 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 JAKMIP2Q96AA8 810 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 RABGAP1Q9Y3P9 1069 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 DOCK5Q9H7D0 1870 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
NCL-201ENST00000322723 LRRC53A6NM62 1247 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 SLITRK3O94933 977 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 PLEKP08567 350 aaPredicted RBP13.23□□□□□ -0.29
NCL-201ENST00000322723 SNAP25P60880 206 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 PRR16Q569H4 304 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 BEND6Q5SZJ8 279 aaPredicted RBP13.23□□□□□ -0.29
NCL-201ENST00000322723 CLEC4DQ8WXI8 215 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 RUBCNQ92622 972 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 PNKPQ96T60 521 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 SIX2Q9NPC8 291 aa13.23□□□□□ -0.29
NCL-201ENST00000322723 ZNHIT6Q9NWK9 470 aaKnown RBP13.23□□□□□ -0.29
NCL-201ENST00000322723 ZBTB48P10074 688 aaPredicted RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 TAL1P17542 331 aaPredicted RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 POLD1P28340 1107 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 JAM2P57087 298 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 ACBD3Q9H3P7 528 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 DMAC2Q9NW81 257 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 FEZ2Q9UHY8 353 aaPredicted RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 ZNRF3Q9ULT6 936 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 TARSL2A2RTX5 802 aaKnown RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 ATP1A1P05023 1023 aaKnown RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 TUBBP07437 444 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 KNOP1Q1ED39 458 aaKnown RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 MYCBPQ99417 103 aaPredicted RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 RUSC1Q9BVN2 902 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 MAP3K20Q9NYL2 800 aaKnown RBP13.22□□□□□ -0.29
NCL-201ENST00000322723 MYH10P35580 1976 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 SPDYE3A6NKU9 549 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 GAP43P17677 238 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 KIF11P52732 1056 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 RBM5P52756 815 aaKnown RBP eCLIP13.22□□□□□ -0.293e-12■■■■■ 43.4
NCL-201ENST00000322723 RINT1Q6NUQ1 792 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 CDAN1Q8IWY9 1227 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 RPGRIP1Q96KN7 1286 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
NCL-201ENST00000322723 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.29
NCL-201ENST00000322723 ANXA13P27216 316 aa13.21□□□□□ -0.29
NCL-201ENST00000322723 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
NCL-201ENST00000322723 FAM83BQ5T0W9 1011 aa13.21□□□□□ -0.29
NCL-201ENST00000322723 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
NCL-201ENST00000322723 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
NCL-201ENST00000322723 TGFB1I1O43294 461 aa13.21□□□□□ -0.29
NCL-201ENST00000322723 PRKCIP41743 596 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms