RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 GLIS3Q8NEA6 775 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 KAT2BQ92831 832 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
MKS1-201ENST00000313863 CCT8L2Q96SF2 557 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 KCTD10Q9H3F6 313 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 SLITRK6Q9H5Y7 841 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 INTUQ9ULD6 942 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 STK24Q9Y6E0 443 aa15.16■□□□□ 0.02
MKS1-201ENST00000313863 A0A0A6YYK5 440 aaPredicted RBP15.15■□□□□ 0.02
MKS1-201ENST00000313863 ZSCAN5CA6NGD5 496 aaPredicted RBP15.15■□□□□ 0.02
MKS1-201ENST00000313863 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 ERCC3P19447 782 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 CLK2P49760 499 aaKnown RBP15.15■□□□□ 0.02
MKS1-201ENST00000313863 MNAT1P51948 309 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 ARMC9Q7Z3E5 817 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 CCDC26Q8TAB7 109 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 MYCBPAPQ8TBZ2 947 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.026e-8■■■■■ 30.2
MKS1-201ENST00000313863 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 PCDHA2Q9Y5H9 948 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 FRMPD2Q68DX3 1309 aaPredicted RBP15.15■□□□□ 0.02
MKS1-201ENST00000313863 CEP104O60308 925 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 AFPP02771 609 aaKnown RBP15.15■□□□□ 0.02
MKS1-201ENST00000313863 PRKCIP41743 596 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 HAS1Q92839 578 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 ACTR5Q9H9F9 607 aaPredicted RBP15.15■□□□□ 0.02
MKS1-201ENST00000313863 ARMCX3Q9UH62 379 aaPredicted RBP15.15■□□□□ 0.02
MKS1-201ENST00000313863 FBXL5Q9UKA1 691 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
MKS1-201ENST00000313863 FRMD3A2A2Y4 597 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 E7EVH7 732 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 CALUO43852 315 aaPredicted RBP15.14■□□□□ 0.01
MKS1-201ENST00000313863 GFPT2O94808 682 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 HSD17B3P37058 310 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 FNTAP49354 379 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 NPEPPSP55786 919 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 PPP2R5EQ16537 467 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 GPATCH4Q5T3I0 446 aaKnown RBP15.14■□□□□ 0.01
MKS1-201ENST00000313863 SLFN12Q8IYM2 578 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 TBC1D22AQ8WUA7 517 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 SCFD1Q8WVM8 642 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 METTL14Q9HCE5 456 aaKnown RBP15.14■□□□□ 0.01
MKS1-201ENST00000313863 FAM114A2Q9NRY5 505 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 SUCLA2Q9P2R7 463 aaPredicted RBP15.14■□□□□ 0.01
MKS1-201ENST00000313863 KIAA1024Q9UPX6 916 aa15.14■□□□□ 0.01
MKS1-201ENST00000313863 GOLGA6L7A0A1B0GV03 622 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 BHMG1C9JSJ3 638 aaPredicted RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 EDIL3O43854 480 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 CTNNA1P35221 906 aaKnown RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 PTK2Q05397 1052 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 CLUL1Q15846 466 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 ECM1Q16610 540 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 SPDYCQ5MJ68 293 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 IRF2BP2Q7Z5L9 587 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 LRRC57Q8N9N7 239 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 ERMNQ8TAM6 284 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 PACSIN1Q9BY11 444 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 PACSIN2Q9UNF0 486 aaPredicted RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 TRAF3IP3Q9Y228 551 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 H2AFZP0C0S5 128 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 UCHL3P15374 230 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 NR2F2P24468 414 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 RPL13P26373 211 aaKnown RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 DDR1Q08345 913 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 ZNF543Q08ER8 600 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 GRIK5Q16478 980 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 EXOC3L4Q17RC7 722 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 RNF187Q5TA31 235 aaPredicted RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 FBXW10Q5XX13 1052 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 ALKBH5Q6P6C2 394 aaKnown RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 H2AFVQ71UI9 128 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 PEX26Q7Z412 305 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 FMNL3Q8IVF7 1028 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 P3H4Q92791 437 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 PSTPIP2Q9H939 334 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 A1CFQ9NQ94 594 aaKnown RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 TBC1D7Q9P0N9 293 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 NAGPAQ9UK23 515 aa15.13■□□□□ 0.01
MKS1-201ENST00000313863 DIS3Q9Y2L1 958 aaKnown RBP15.13■□□□□ 0.01
MKS1-201ENST00000313863 MYO3BQ8WXR4 1341 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 GMNCA6NCL1 334 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 KRIT1O00522 736 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 SLC16A3O15427 465 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 SART1O43290 800 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 TTLL1O95922 423 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 XRCC5P13010 732 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 CYP11B2P19099 503 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 RNASE9P60153 205 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 ENOX2Q16206 610 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 MOXD1Q6UVY6 613 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 CCDC121Q6ZUS5 278 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 ZNF571Q7Z3V5 609 aaPredicted RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 RPAINQ86UA6 219 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 ADGRF4Q8IZF3 695 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 RASGEF1CQ8N431 466 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms