RNA–Protein interactions for RNA: ENST00000283875.5

GTF2E1-201, Transcript of general transcription factor IIE subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2E1, Length 3,012 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-201ENST00000283875 MYH2Q9UKX2 1941 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 TRIM43BA6NCK2 446 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 HNRNPRO43390 633 aaKnown RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 TIMM44O43615 452 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 TBC1D12O60347 775 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 HPDP32754 393 aaPredicted RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 CAMK2BQ13554 666 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 KPNB1Q14974 876 aaKnown RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 LONRF3Q496Y0 759 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 TMEM259Q4ZIN3 620 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 WASHC2DQ5SRD0 308 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 ZNF362Q5T0B9 420 aaPredicted RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 SYDE2Q5VT97 1194 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 C8orf74Q6P047 294 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 CCDC65Q8IXS2 484 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 NACC2Q96BF6 587 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 KLHL29Q96CT2 875 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 ZNF274Q96GC6 653 aaPredicted RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 ABHD8Q96I13 439 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 NFU1Q9UMS0 254 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 ECM29Q5VYK3 1845 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 MRC1P22897 1456 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 LRP6O75581 1613 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 ACTN4O43707 911 aaKnown RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 SNX3O60493 162 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 PABPC4LP0CB38 370 aaKnown RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 XBP1P17861 261 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 HSD17B3P37058 310 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 PTDSS1P48651 473 aaKnown RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 RAD23BP54727 409 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 NMIQ13287 307 aaPredicted RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 CFAP157Q5JU67 520 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 RAB3IPQ96QF0 476 aaPredicted RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 THAP9Q9H5L6 903 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 RETREG1Q9H6L5 497 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 QTRT2Q9H974 415 aaKnown RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 IL1RAPL1Q9NZN1 696 aa8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 SUCLA2Q9P2R7 463 aaPredicted RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 R3HDM2Q9Y2K5 976 aaKnown RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
GTF2E1-201ENST00000283875 SPATA31A1Q5TZJ5 1347 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 TAF5LO75529 589 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 TPPPO94811 219 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 UBTFL1P0CB47 393 aaPredicted RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 IDEP14735 1019 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 TCF7P36402 384 aaPredicted RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 MMP13P45452 471 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 SERPINB4P48594 390 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 EMP3P54852 163 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 LIN52Q52LA3 116 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 WDR59Q6PJI9 974 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 MAEAQ7L5Y9 396 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 CCNJLQ8IV13 435 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 PIGOQ8TEQ8 1089 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 IFT81Q8WYA0 676 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 CHP1Q99653 195 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 ECHDC1Q9NTX5 307 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 CPDO75976 1380 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 RCCD1A6NED2 376 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 GM2AP17900 193 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 EXOSC10Q01780 885 aaKnown RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 PDIA6Q15084 440 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 HLFQ16534 295 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 P3H1Q32P28 736 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 CCDC152Q4G0S7 254 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 SLC44A4Q53GD3 710 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 FAM133BQ5BKY9 247 aaKnown RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 EPHA10Q5JZY3 1008 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 AMIGO3Q86WK7 504 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 CACTIN-AS1Q8N1I8 211 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 DQX1Q8TE96 717 aaKnown RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 CASKIN2Q8WXE0 1202 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 ZNF594Q96JF6 807 aaPredicted RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 FAM227BQ96M60 508 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 AGBL1Q96MI9 1066 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 GBP5Q96PP8 586 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 MAP3K14Q99558 947 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 USP44Q9H0E7 712 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 LRMDAQ9H2I8 198 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 ADAM7Q9H2U9 754 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 LARSQ9P2J5 1176 aaKnown RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 DBF4Q9UBU7 674 aaPredicted RBP8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 PRKAG3Q9UGI9 489 aa8.02□□□□□ -1.13
GTF2E1-201ENST00000283875 EIF4E1BA6NMX2 242 aaKnown RBP8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 SNRPA1P09661 255 aaKnown RBP8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 RASA1P20936 1047 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 MTTPP55157 894 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 RHBDL3P58872 404 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 SOGA3Q5TF21 947 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 UNC13DQ70J99 1090 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 LONP2Q86WA8 852 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 FAM89AQ96GI7 184 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 LACRTQ9GZZ8 138 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 ISCUQ9H1K1 167 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 RXFP1Q9HBX9 757 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 FAIMQ9NVQ4 179 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 NMRK1Q9NWW6 199 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 USP20Q9Y2K6 914 aa8.01□□□□□ -1.13
GTF2E1-201ENST00000283875 HYOU1Q9Y4L1 999 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms