RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Vav3Q9R0C8 847 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mbtps1Q9WTZ2 1052 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 PfkpQ9WUA3 784 aaKnown RBP9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mia3Q8BI84 1930 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Palb2Q3U0P1 1104 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Gm1587Q3UT80 123 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ccna1Q61456 421 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ddr2Q62371 854 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Pcdhb14Q6PB90 796 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Srek1Q8BZX4 494 aaKnown RBP9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Hexim1Q8R409 356 aaKnown RBP9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Arhgap8Q9CXP4 425 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Wdr78E9PYY5 807 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Zscan29E9Q5B4 869 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ccdc102aQ3TMW1 549 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Q5XFZ0 217 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Azin2Q8BVM4 459 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ddx19bQ8BZY3 494 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Fam126bQ8C729 530 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ranbp17Q99NF8 1088 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Rpap3Q9D706 660 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cabp5Q9JLK3 173 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Plcb1Q9Z1B3 1216 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Myo7aP97479 2215 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Lta4hP24527 611 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Trappc10Q3TLI0 1259 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mier3Q3UHF3 551 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Isy1Q69ZQ2 285 aaKnown RBP9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Slc20a2Q80UP8 656 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ehd2Q8BH64 543 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Fam49aQ8BHZ0 323 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Snx17Q8BVL3 470 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Dis3Q9CSH3 958 aaKnown RBP9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Polr2dQ9D7M8 142 aaKnown RBP9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mipol1Q9D9F8 279 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Rbp7Q9EPC5 134 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Sgpp1Q9JI99 430 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tll2Q9WVM6 1012 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Col4a3Q9QZS0 1669 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 DohhA0A1Y7VJ29 135 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Phtf2Q8CB19 747 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Zcchc18Q8VD24 393 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mical1Q8VDP3 1048 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tmco4Q91WU4 631 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Themis2Q91YX0 663 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Krt23Q99PS0 422 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Snx29Q9D3S3 818 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Fbxo16Q9QZM9 334 aa9.31□□□□□ -0.92
Trim39-205ENSMUST00000173369 Dock3Q8CIQ7 2027 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Map7d1A2AJI0 846 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Dnajc25A2ALW5 357 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cspp1B2RX88 1205 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Gm20503G3UZK1 150 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Esr2O08537 530 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cdc25aP48964 514 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Erbb2P70424 1256 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Drp2Q05AA6 957 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 C6.1alQ7M757 291 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Arrdc3Q7TPQ9 414 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Adnp2Q8CHC8 1165 aaKnown RBP9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Bud13Q8R149 637 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Znf445Q8R2V3 986 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Oit3Q8R4V5 546 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Hdhd5Q91WM2 419 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ccdc112A0AUP1 442 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Kansl3A2RSY1 903 aaKnown RBP9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Krt78E9Q0F0 1068 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Sptlc1O35704 473 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 PrkceP16054 737 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Plekha7Q3UIL6 1118 aaKnown RBP9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Sun3Q5SS91 320 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Avpr1aQ62463 423 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cep120Q7TSG1 988 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tbc1d22bQ80VE5 505 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Bmp3Q8BHE5 468 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Pwp2Q8BU03 919 aaKnown RBP9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Nemp2Q8CB65 421 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Zbtb9Q8CDC7 459 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Zswim3Q8CFL8 695 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Bclaf1Q8K019 919 aaKnown RBP9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Fubp1Q91WJ8 651 aaKnown RBP9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 DcpsQ9DAR7 338 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Lypla2Q9WTL7 231 aa9.3□□□□□ -0.92
Trim39-205ENSMUST00000173369 Slc6a21A0A1B0GSD2 748 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 1700018F24RikB2RW27 314 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Axin2O88566 840 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mgat3Q10470 538 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Eif3j1Q3UGC7 261 aaKnown RBP9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Wdr93Q402B2 695 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Polr3gQ6NXY9 223 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tmx4Q8C0L0 335 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Pnma1Q8C1C8 353 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 ClmnQ8C5W0 1052 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mtmr3Q8K296 1196 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cabp7Q91ZM8 215 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Zfp64Q99KE8 643 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 AacsQ9D2R0 672 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Chaf1aQ9QWF0 911 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Gm5737A0A140LI11 423 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 259.6 ms