RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Trpm8Q8R4D5 1104 aa13.17□□□□□ -0.3
Ufd1-201ENSMUST00000005394 NptxrQ99J85 493 aa13.17□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Armc9Q9D2I5 817 aa13.17□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Mzb1Q9D8I1 188 aa13.17□□□□□ -0.3
Ufd1-201ENSMUST00000005394 EhhadhQ9DBM2 718 aa13.17□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Mxra8Q9DBV4 442 aa13.17□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Fam129cD3YZB0 591 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Slc39a2G3X943 309 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Sept2P42208 361 aaKnown RBP13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 MagohP61327 146 aaKnown RBP13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Phactr1Q2M3X8 580 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Nlrx1Q3TL44 975 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Tmed8Q3UHI4 326 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Tspyl3Q3UYP3 334 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Rnf207Q3V3A7 635 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Myo19Q5SV80 963 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ppp2r5eQ61151 467 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Sin3bQ62141 1098 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 KaznQ69ZS8 779 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Anks6Q6GQX6 883 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Krt9Q6RHW0 743 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Stambpl1Q76N33 436 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Klhl7Q8BUL5 586 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Spire2Q8K1S6 718 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 ItpkaQ8R071 459 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Bzw2Q91VK1 419 aaKnown RBP13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Dtnbp1Q91WZ8 352 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 MagohbQ9CQL1 146 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Acot3Q9QYR7 432 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Psmd10Q9Z2X2 231 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Megf6Q80V70 1572 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Fam71aB7XG49 585 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Tmod1P49813 359 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 GmncQ3URY2 333 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 EregQ61521 162 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 GmipQ6PGG2 971 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Rnaseh2bQ80ZV0 308 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 FtoQ8BGW1 502 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Rint1Q8BZ36 792 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ccdc80Q8R2G6 949 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Sgms1Q8VCQ6 419 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 ParnQ8VDG3 624 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Lzts2Q91YU6 671 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 PawrQ925B0 333 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 ArpinQ9D0A3 226 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Rexo2Q9D8S4 237 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ccdc182Q9D9C6 152 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Sertad2Q9JJG5 309 aa13.16□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Nup98Q6PFD9 1816 aaKnown RBP13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Zfp275G3X904 499 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Tuft1O08970 390 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Men1O88559 611 aaKnown RBP13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Actn4P57780 912 aaKnown RBP13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Cul4aQ3TCH7 759 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Pnma5Q5DTT8 618 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 GartQ64737 1010 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ccdc172Q810N9 267 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Btbd9Q8C726 612 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ccdc15Q8C9M2 810 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 OplahQ8K010 1288 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 MyripQ8K3I4 856 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ero1aQ8R180 464 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 C1qtnf12Q8R2Z0 308 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Krt79Q8VED5 531 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 1700020D05RikQ99PB1 294 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Pramef12Q9D2F1 463 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 IscuQ9D7P6 168 aa13.15□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Klhl33G3UW92 533 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Abcb4P21440 1276 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Man1a2P39098 641 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 SpertQ32MG2 446 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tnfaip8l3Q3TBL6 204 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fhdc1Q3ULZ2 1149 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Kctd16Q5DTY9 427 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 E2f5Q61502 335 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Sorbs1Q62417 1290 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 SugctQ7TNE1 436 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ttll4Q80UG8 1193 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gramd4Q8CB44 633 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Lgi2Q8K4Z0 550 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Plcb4Q91UZ1 1175 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Krt82Q99M74 516 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Q9D1Z2 194 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Lonrf3Q9D4H7 753 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gtf2h1Q9DBA9 547 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fxr2Q9WVR4 673 aaKnown RBP13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 D830030K20RikE9PYQ5 218 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm3043K7N693 218 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm16440K7N6G6 218 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm6121L7MUF1 212 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm2244L7N2A3 218 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm3278L7N2D2 218 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm8271L7N2E2 218 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Abl1P00520 1123 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tagap1P0CAX8 505 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 PltpP55065 493 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pfkfb2P70265 519 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gcnt1Q09324 428 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gdpd4Q3TT99 632 aa13.14□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Znf697Q569E7 569 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms