RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	HEATR6	Q6AI08	1181 aa	Known RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	USP50	Q70EL3	339 aa	Predicted RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	DNAJB8	Q8NHS0	232 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	MORC4	Q8TE76	937 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	FAM89A	Q96GI7	184 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	EYA3	Q99504	573 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	LGR4	Q9BXB1	951 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	CEP41	Q9BYV8	373 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	SLK	Q9H2G2	1235 aa	Predicted RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	SEMA6C	Q9H3T2	930 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	CWC25	Q9NXE8	425 aa	Predicted RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	NOP58	Q9Y2X3	529 aa	Known RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	PASK	Q96RG2	1323 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	KRBA1	A5PL33	1030 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	ANKRD34B	A5PLL1	514 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	ELL2	O00472	640 aa	Predicted RBP	7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	CBFA2T2	O43439	604 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	ASMTL	O95671	621 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	HTRA3	P83110	453 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	FOXB2	Q5VYV0	432 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	CIAPIN1	Q6FI81	312 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523		Q6ZS46	218 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	FILIP1	Q7Z7B0	1213 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	LRRC47	Q8N1G4	583 aa	Known RBP	7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	C8orf58	Q8NAV2	365 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	PPP1R14A	Q96A00	147 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	FAM46A	Q96IP4	442 aa	Known RBP	7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	METTL22	Q9BUU2	404 aa	Predicted RBP	7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	MKRN2	Q9H000	416 aa	Known RBP	7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	KLHL25	Q9H0H3	589 aa		7.78	□□□□□ -1.16
CASC19-238	ENST00000641523	ADARB2	Q9NS39	739 aa	Known RBP	7.78	□□□□□ -1.16
CASC19-238	ENST00000641523		A0A1W2PQU0	124 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	C9orf172	C9J069	976 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	PPP1R12A	O14974	1030 aa	Predicted RBP	7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	PDE8A	O60658	829 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	SLITRK5	O94991	958 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	RPS8	P62241	208 aa	Known RBP	7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	C21orf62-AS1	Q17RA5	79 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	TWISTNB	Q3B726	338 aa	Predicted RBP	7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	LETMD1	Q6P1Q0	360 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	KSR2	Q6VAB6	950 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	WDR63	Q8IWG1	891 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	CNTROB	Q8N137	903 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	ZSWIM2	Q8NEG5	633 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	KREMEN1	Q96MU8	473 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	MYD88	Q99836	296 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	GPRC5D	Q9NZD1	345 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	LRP2BP	Q9P2M1	347 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	APEX2	Q9UBZ4	518 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	ZNF451	Q9Y4E5	1061 aa		7.77	□□□□□ -1.17
CASC19-238	ENST00000641523	CCDC194	A0A1B0GVG4	234 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	AGRP	O00253	132 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	WIPF1	O43516	503 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	NAT2	P11245	290 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	RPS12	P25398	132 aa	Known RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	ZNF143	P52747	638 aa	Predicted RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	ADAT2	Q7Z6V5	191 aa	Known RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	TEX2	Q8IWB9	1127 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	LRRN4CL	Q8ND94	238 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	VWCE	Q96DN2	955 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	SGSM3	Q96HU1	749 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	PSMG3-AS1	Q96PY0	264 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	CDC5L	Q99459	802 aa	Known RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	FEZ1	Q99689	392 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	FAN1	Q9Y2M0	1017 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	CNTNAP1	P78357	1384 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	PI4KAP2	A4QPH2	592 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523		H7C1D1	291 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	DNAJC6	O75061	913 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	L1CAM	P32004	1257 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	NRG1	Q02297	640 aa	Predicted RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	CXCL9	Q07325	125 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	TMEM67	Q5HYA8	995 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	ANKRD18A	Q8IVF6	992 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	PI4KAP1	Q8N8J0	262 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	DPF2	Q92785	391 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	CELF1	Q92879	486 aa	Known RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	TSR2	Q969E8	191 aa	Known RBP	7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	MAP3K2	Q9Y2U5	619 aa		7.76	□□□□□ -1.17
CASC19-238	ENST00000641523	COL4A5	P29400	1685 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	LRRC37A	A6NMS7	1700 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	ITGAV	P06756	1048 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	BMP3	P12645	472 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	EPS15	P42566	896 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	GMPS	P49915	693 aa	Predicted RBP	7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	CTSW	P56202	376 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	CDK5R2	Q13319	367 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	AUH	Q13825	339 aa	Known RBP	7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	TCEA2	Q15560	299 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	LONRF2	Q1L5Z9	754 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	C7orf61	Q8IZ16	206 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	TSPYL6	Q8N831	410 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	EZH1	Q92800	747 aa	Predicted RBP	7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	NACC1	Q96RE7	527 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	YIPF2	Q9BWQ6	316 aa		7.75	□□□□□ -1.17
CASC19-238	ENST00000641523	SPC25	Q9HBM1	224 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms