RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 GREM2Q9H772 168 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 FBRSQ9HAH7 460 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 PIDD1Q9HB75 910 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 FAM105AQ9NUU6 356 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 ACTR10Q9NZ32 417 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 ZNF70Q9UC06 446 aaPredicted RBP7.55□□□□□ -1.2
UBFD1-209ENST00000569919 TJP2Q9UDY2 1190 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 STAP2Q9UGK3 403 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 RIPOR2Q9Y4F9 1068 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 SSC5DA1L4H1 1573 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 UPK3BL1B0FP48 263 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 BTBD19C9JJ37 291 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 UPK3BL2E5RIL1 263 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 FARP2O94887 1054 aaPredicted RBP7.54□□□□□ -1.2
UBFD1-209ENST00000569919 TFRCP02786 760 aaKnown RBP7.54□□□□□ -1.2
UBFD1-209ENST00000569919 IL1R1P14778 569 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 NME1P15531 152 aaKnown RBP7.54□□□□□ -1.2
UBFD1-209ENST00000569919 GLB1P16278 677 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 GUCY2CP25092 1073 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 PREPP48147 710 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
UBFD1-209ENST00000569919 SNAPC2Q13487 334 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 VGLL4Q14135 290 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 ARSHQ5FYA8 562 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 CDCP2Q5VXM1 449 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 NLRC3Q7RTR2 1065 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 ZNF804AQ7Z570 1209 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 ERO1BQ86YB8 467 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.54□□□□□ -1.2
UBFD1-209ENST00000569919 U2AF1L4Q8WU68 220 aaKnown RBP7.54□□□□□ -1.2
UBFD1-209ENST00000569919 WFDC12Q8WWY7 111 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 ISL2Q96A47 359 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 TMEM87BQ96K49 555 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 CEP41Q9BYV8 373 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 PIF1Q9H611 641 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 PCDHAC2Q9Y5I4 1007 aa7.54□□□□□ -1.2
UBFD1-209ENST00000569919 ZNF646O15015 1829 aaPredicted RBP7.54□□□□□ -1.2
UBFD1-209ENST00000569919 HTTP42858 3142 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 CEP290O15078 2479 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 A0A1W2PQH9 124 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 SART1O43290 800 aaKnown RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 NOS3P29474 1203 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 CHRNDQ07001 517 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 NEXNQ0ZGT2 675 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 BMS1Q14692 1282 aaKnown RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 NKG7Q16617 165 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 LRIT3Q3SXY7 679 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 SLC6A19Q695T7 634 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 KSR2Q6VAB6 950 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 Q6ZS46 218 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 UBE3DQ7Z6J8 389 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 TTC6Q86TZ1 520 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 MRPL41Q8IXM3 137 aaKnown RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 SMYD4Q8IYR2 804 aaPredicted RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 CELF2-AS1Q8N7Q2 184 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 C19orf47Q8N9M1 422 aaKnown RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 KCT2Q8NC54 265 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 FAM13CQ8NE31 585 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 HOOK2Q96ED9 719 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 TEPSINQ96N21 525 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 UBL7Q96S82 380 aaPredicted RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 TDRD3Q9H7E2 651 aaKnown RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 CNNM2Q9H8M5 875 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 SSU72Q9NP77 194 aaKnown RBP7.53□□□□□ -1.2
UBFD1-209ENST00000569919 SIRPGQ9P1W8 387 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 MAP3K2Q9Y2U5 619 aa7.53□□□□□ -1.2
UBFD1-209ENST00000569919 K7ELQ4 463 aaPredicted RBP7.52□□□□□ -1.21
UBFD1-209ENST00000569919 CSF1RP07333 972 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 ACRP10323 421 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 KLRK1P26718 216 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 YARSP54577 528 aaKnown RBP7.52□□□□□ -1.21
UBFD1-209ENST00000569919 SLBPQ14493 270 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBFD1-209ENST00000569919 CCDC30Q5VVM6 783 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 GIMAP6Q6P9H5 292 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 ANKRD23Q86SG2 305 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 NOP9Q86U38 636 aaKnown RBP7.52□□□□□ -1.21
UBFD1-209ENST00000569919 SLFN12Q8IYM2 578 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 DZIP1LQ8IYY4 767 aaKnown RBP7.52□□□□□ -1.21
UBFD1-209ENST00000569919 TAB3Q8N5C8 712 aaPredicted RBP7.52□□□□□ -1.21
UBFD1-209ENST00000569919 GDF15Q99988 308 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 ST7Q9NRC1 585 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 MTMR10Q9NXD2 777 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 CPA4Q9UI42 421 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 MYPNQ86TC9 1320 aa7.52□□□□□ -1.21
UBFD1-209ENST00000569919 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.51□□□□□ -1.21
UBFD1-209ENST00000569919 TCP10L2B9ZVM9 353 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 PDHXO00330 501 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
UBFD1-209ENST00000569919 TNFRSF10CO14798 259 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 GAS2O43903 313 aaKnown RBP7.51□□□□□ -1.21
UBFD1-209ENST00000569919 IGKV5-2P06315 115 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 RAG1P15918 1043 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 CTGFP29279 349 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 USP11P51784 963 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 PPATQ06203 517 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 PPIL2Q13356 520 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 ADGRE1Q14246 886 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 MBTPS1Q14703 1052 aa7.51□□□□□ -1.21
UBFD1-209ENST00000569919 LARP1BQ659C4 914 aaKnown RBP7.51□□□□□ -1.21
UBFD1-209ENST00000569919 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms