RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 FKBP3Q00688 224 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 GFPT1Q06210 699 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 MTF1Q14872 753 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 UBE3CQ15386 1083 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 C10orf76Q5T2E6 689 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 CDKL2Q92772 493 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 IWS1Q96ST2 819 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 SUFUQ9UMX1 484 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 EEF1B2P24534 225 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 TRAPPC10P48553 1259 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 MMS19Q96T76 1030 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 EPS15L1Q9UBC2 864 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 PCDHB4Q9Y5E5 795 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 TEX33O43247 280 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 PTK2Q05397 1052 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 ABI1Q8IZP0 508 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 UBE2TQ9NPD8 197 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 PRAMEF22A3QJZ6 481 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 FMR1NBQ8N0W7 255 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 GREM2Q9H772 168 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 ANKFY1Q9P2R3 1169 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 FNDC3AQ9Y2H6 1198 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 YWHAEP62258 255 aaKnown RBP11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 CERKQ8TCT0 537 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 TBCKQ8TEA7 893 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 GYG2O15488 501 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 ZSCAN20P17040 1043 aaPredicted RBP11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 USP14P54578 494 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 PPP2R2AP63151 447 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 LRRC14Q15048 493 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 NBPF9Q3BBW0 867 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 TRIML2Q8N7C3 387 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 ANKRD7Q92527 254 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 TUBB6Q9BUF5 446 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 HAUS2Q9NVX0 235 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 GGT7Q9UJ14 662 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.64
GTF3C1-202ENST00000561623 LAD1O00515 517 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 CPP00450 1065 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 ATP1A1P05023 1023 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 CCDC157Q569K6 752 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 CAPRIN2Q6IMN6 1127 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 RINT1Q6NUQ1 792 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 SYT2Q8N9I0 419 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 NSMCE1Q8WV22 266 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 POMGNT1Q8WZA1 660 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 TRIM42Q8IWZ5 723 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 NT5C1BQ96P26 610 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 IRX2Q9BZI1 471 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 SPAG7O75391 227 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 UBXN2AP68543 259 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 SEPT2Q15019 361 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 NLRX1Q86UT6 975 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 POLD4Q9HCU8 107 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 USP40Q9NVE5 1235 aa11.02□□□□□ -0.65
GTF3C1-202ENST00000561623 ITKQ08881 620 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 GLE1Q53GS7 698 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 OSBPL9Q96SU4 736 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 TRAIPQ9BWF2 469 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 SMYD3Q9H7B4 428 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 GINM1Q9NU53 330 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 ZSWIM5Q9P217 1185 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 PACSIN2Q9UNF0 486 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 POLA2Q14181 598 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 AK8Q96MA6 479 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 BPIFA3Q9BQP9 254 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 IRAK4Q9NWZ3 460 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 PALM3A6NDB9 673 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 WDR46O15213 610 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 DCTN3O75935 186 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 BBS9Q3SYG4 887 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 ALKBH5Q6P6C2 394 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 SCINQ9Y6U3 715 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 GOLGA8SH3BPF8 625 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 P4HA1P13674 534 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 RFX8Q6ZV50 586 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 TTC17Q96AE7 1141 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 CCDC138Q96M89 665 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 ZFP69BQ9UJL9 534 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 ESYT2A0FGR8 921 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 LRRC53A6NM62 1247 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 EEF1DP29692 281 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 RAD23BP54727 409 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 Q3C1V9 767 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 DPF2Q92785 391 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 NUB1Q9Y5A7 615 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 DMP1Q13316 513 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 TRMT10CQ7L0Y3 403 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 ATP6V1G3Q96LB4 118 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 TEKT3Q9BXF9 490 aa11.01□□□□□ -0.65
GTF3C1-202ENST00000561623 ACTN1P12814 892 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 LCORLQ8N3X6 602 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 PPARGC1AQ9UBK2 798 aaKnown RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 LMNAP02545 664 aaKnown RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 IFNAR1P17181 557 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 ADD2P35612 726 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms