RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
MARK3-213ENST00000558611 PABPC1P11940 636 aaKnown RBP12.08□□□□□ -0.48
MARK3-213ENST00000558611 CPEP16870 476 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 RPS8P62241 208 aaKnown RBP12.08□□□□□ -0.48
MARK3-213ENST00000558611 SLBPQ14493 270 aaKnown RBP eCLIP12.08□□□□□ -0.48
MARK3-213ENST00000558611 NKG7Q16617 165 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 NSMFQ6X4W1 530 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 DMRTC2Q8IXT2 367 aaPredicted RBP12.08□□□□□ -0.48
MARK3-213ENST00000558611 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 PPM1KQ8N3J5 372 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 UBR7Q8N806 425 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 SUPT20HQ8NEM7 779 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 BAHD1Q8TBE0 780 aaPredicted RBP12.08□□□□□ -0.48
MARK3-213ENST00000558611 APEX2Q9UBZ4 518 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 TCEAL9Q9UHQ7 104 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 NID1P14543 1247 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 SDSP20132 328 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
MARK3-213ENST00000558611 C1orf229Q6ZS94 237 aaPredicted RBP12.07□□□□□ -0.48
MARK3-213ENST00000558611 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 BVESQ8NE79 360 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 EDARADDQ8WWZ3 215 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 DDX1Q92499 740 aaKnown RBP12.07□□□□□ -0.48
MARK3-213ENST00000558611 PPP1R14AQ96A00 147 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
MARK3-213ENST00000558611 VPS33BQ9H267 617 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 GREM2Q9H772 168 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
MARK3-213ENST00000558611 KIF16BQ96L93 1317 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 ZNF541Q9H0D2 1346 aa12.07□□□□□ -0.48
MARK3-213ENST00000558611 CCDC194A0A1B0GVG4 234 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 FZD9O00144 591 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 PPIP5K2O43314 1243 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 DEAF1O75398 565 aaPredicted RBP12.06□□□□□ -0.48
MARK3-213ENST00000558611 PPM1BO75688 479 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 CSF1RP07333 972 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 VSIG8P0DPA2 414 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 C1QTNF8P60827 252 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 GPSM2P81274 684 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 AOC3Q16853 763 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 AHI1Q8N157 1196 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 ACDQ96AP0 544 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 FGD4Q96M96 766 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 DPH2Q9BQC3 489 aaPredicted RBP12.06□□□□□ -0.48
MARK3-213ENST00000558611 COL25A1Q9BXS0 654 aaPredicted RBP12.06□□□□□ -0.48
MARK3-213ENST00000558611 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
MARK3-213ENST00000558611 WHRNQ9P202 907 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 SFMBT1Q9UHJ3 866 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 UTYO14607 1347 aa12.06□□□□□ -0.48
MARK3-213ENST00000558611 PRODHO43272 600 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 FOXO4P98177 505 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 DUOXA2Q1HG44 320 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 CNNM4Q6P4Q7 775 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 ADAT2Q7Z6V5 191 aaKnown RBP12.05□□□□□ -0.48
MARK3-213ENST00000558611 ATL2Q8NHH9 583 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 UBASH3BQ8TF42 649 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 OSBP2Q969R2 916 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 RCC1LQ96I51 464 aaKnown RBP12.05□□□□□ -0.48
MARK3-213ENST00000558611 BTBD6Q96KE9 485 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 RRAGCQ9HB90 399 aa12.05□□□□□ -0.48
MARK3-213ENST00000558611 NOB1Q9ULX3 412 aaKnown RBP12.05□□□□□ -0.48
MARK3-213ENST00000558611 NOP56O00567 594 aaKnown RBP12.04□□□□□ -0.48
MARK3-213ENST00000558611 DDNO94850 711 aaPredicted RBP12.04□□□□□ -0.48
MARK3-213ENST00000558611 KIAA2012Q0VF49 1180 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 COL9A3Q14050 684 aaPredicted RBP12.04□□□□□ -0.48
MARK3-213ENST00000558611 TTLL4Q14679 1199 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 RNFT1Q5M7Z0 435 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
MARK3-213ENST00000558611 GALNT6Q8NCL4 622 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 RIN3Q8TB24 985 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 MRGPRX3Q96LB0 322 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 C8orf48Q96LL4 319 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 API5Q9BZZ5 524 aaKnown RBP12.04□□□□□ -0.48
MARK3-213ENST00000558611 CYP4F12Q9HCS2 524 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
MARK3-213ENST00000558611 POLLQ9UGP5 575 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
MARK3-213ENST00000558611 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
MARK3-213ENST00000558611 ARAP2Q8WZ64 1704 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 EFCAB14O75071 495 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 DNAJC8O75937 253 aaPredicted RBP12.03□□□□□ -0.48
MARK3-213ENST00000558611 TOMM70O94826 608 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 NPTXRO95502 500 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 EYA4O95677 639 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 NBPF7P0C2Y1 421 aaPredicted RBP12.03□□□□□ -0.48
MARK3-213ENST00000558611 ADH5P11766 374 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
MARK3-213ENST00000558611 POU3F2P20265 443 aaPredicted RBP12.03□□□□□ -0.48
MARK3-213ENST00000558611 CD247P20963 164 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
MARK3-213ENST00000558611 EPHB1P54762 984 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 EPHA10Q5JZY3 1008 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 POMZP3Q6PJE2 187 aa12.03□□□□□ -0.48
MARK3-213ENST00000558611 SMG8Q8ND04 991 aaKnown RBP12.03□□□□□ -0.48
MARK3-213ENST00000558611 TBC1D16Q8TBP0 767 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms