RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RIC8AQ9NPQ8 531 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 AMFRQ9UKV5 643 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 DIP2AQ14689 1571 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 PSMD14O00487 310 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 ENTPD3O75355 529 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 IFNB1P01574 187 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 MYL1P05976 194 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 PLA2G4BP0C869 781 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 CDC25AP30304 524 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 FKBP3Q00688 224 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 MTMR2Q13614 643 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 MAP7D1Q3KQU3 841 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SPATA1Q5VX52 437 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 TWF2Q6IBS0 349 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 TBC1D10CQ8IV04 446 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 NEDD1Q8NHV4 660 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 FAM81BQ96LP2 452 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 TRIM31Q9BZY9 425 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 CPVLQ9H3G5 476 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 TOPORSQ9NS56 1045 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 PIK3C2BO00750 1634 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ATP8B3O60423 1300 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ITKQ08881 620 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ALCAMQ13740 583 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 COG2Q14746 738 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 NECTIN1Q15223 517 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 E2F4Q16254 413 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 USP17L6PQ6QN14 398 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 DSTYKQ6XUX3 929 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 OSBPL5Q9H0X9 879 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 PCIF1Q9H4Z3 704 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 SLITRK6Q9H5Y7 841 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ZFYVE28Q9HCC9 887 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 PCDHA5Q9Y5H7 936 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 MADDQ8WXG6 1647 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 FRMPD1Q5SYB0 1578 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 C19orf81C9J6K1 198 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 NTSR2O95665 410 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 XPAP23025 273 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 SCARF1Q14162 830 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 NKX1-1Q15270 411 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 SLFN12LQ6IEE8 588 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 BBS5Q8N3I7 341 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 NSUN4Q96CB9 384 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 SMC6Q96SB8 1091 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 PSMB7Q99436 277 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 XPO4Q9C0E2 1151 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 LRRC4Q9HBW1 653 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 LMBRD1Q9NUN5 540 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 NKIRAS1Q9NYS0 192 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 V9GYY5 206 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 NEXMIFQ5QGS0 1516 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 DENND3A2RUS2 1198 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 AKR1B1P15121 316 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 SLC12A2P55011 1212 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 LRRC41Q15345 812 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 RABL6Q3YEC7 729 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 SLFNL1Q499Z3 407 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 PPP1R18Q6NYC8 613 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ARMCX2Q7L311 632 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 TAOK1Q7L7X3 1001 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ENAHQ8N8S7 591 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 RSAD2Q8WXG1 361 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 MRFAP1L1Q96HT8 127 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 DHTKD1Q96HY7 919 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 CNOT6LQ96LI5 555 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 CPSF2Q9P2I0 782 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 INPP5FQ9Y2H2 1132 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 INO80Q9ULG1 1556 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 DCCP43146 1447 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 NEDD4P46934 1319 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 A6NJR5 290 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 CELF2O95319 508 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 H2AFZP0C0S5 128 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ANXA13P27216 316 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ATP5DP30049 168 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 PHKA2P46019 1235 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 MAPK6Q16659 721 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 QRICH1Q2TAL8 776 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 HHIPL2Q6UWX4 724 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 H2AFVQ71UI9 128 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 MAP7D3Q8IWC1 876 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ZNF280CQ8ND82 737 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 LPAR1Q92633 364 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 TEX13BQ9BXU2 312 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 MTIF3Q9H2K0 278 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ZNF70Q9UC06 446 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 DIP2BQ9P265 1576 aa7.5□□□□□ -1.21
SRGAP1-206ENST00000543397 ZNF233A6NK53 670 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 CLIC2O15247 247 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 NMT2O60551 498 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 SLFN14P0C7P3 912 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PSMC4P43686 418 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 PEX3P56589 373 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 TUBB2AQ13885 445 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 ALX1Q15699 326 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 HS1BP3Q53T59 392 aa7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 ARL6IP4Q66PJ3 421 aaKnown RBP7.49□□□□□ -1.21
SRGAP1-206ENST00000543397 NME8Q8N427 588 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms