RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 OTUB1Q96FW1 271 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-215ENST00000543185 DACH2Q96NX9 599 aa20.81■□□□□ 0.92
HDAC4-215ENST00000543185 PLAAQ9Y263 795 aa20.81■□□□□ 0.92
HDAC4-215ENST00000543185 CCDC22O60826 627 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 DLATP10515 647 aaKnown RBP20.8■□□□□ 0.92
HDAC4-215ENST00000543185 S100A5P33763 92 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 MESDQ14696 234 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 CHCHD3Q9NX63 227 aaKnown RBP20.8■□□□□ 0.92
HDAC4-215ENST00000543185 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.8■□□□□ 0.92
HDAC4-215ENST00000543185 KRT16P08779 473 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 SLC30A9Q6PML9 568 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 USH1GQ495M9 461 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 P2RX5Q93086 422 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 SAP30BPQ9UHR5 308 aaKnown RBP20.8■□□□□ 0.92
HDAC4-215ENST00000543185 SLC12A6Q9UHW9 1150 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 ARL4AP40617 200 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 ADAT2Q7Z6V5 191 aaKnown RBP20.8■□□□□ 0.92
HDAC4-215ENST00000543185 GGA1Q9UJY5 639 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 PCDHB4Q9Y5E5 795 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 ANO9A1A5B4 782 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 DAB1O75553 588 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 TECP42680 631 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 IDI1Q13907 227 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 MMS19Q96T76 1030 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 DISC1Q9NRI5 854 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 PDHA1P08559 390 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 CEP55Q53EZ4 464 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 MAPRE2Q15555 327 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 FANCBQ8NB91 859 aa20.8■□□□□ 0.92
HDAC4-215ENST00000543185 MRPL11Q9Y3B7 192 aaKnown RBP20.8■□□□□ 0.92
HDAC4-215ENST00000543185 RASA4BC9J798 803 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 RASA4O43374 803 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 TFDP1Q14186 410 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 ANKRD36BP1Q96IX9 119 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 GOLGA8TH3BQL2 631 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 GOLGA8HP0CJ92 632 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 IFRD2Q12894 506 aaPredicted RBP20.79■□□□□ 0.92
HDAC4-215ENST00000543185 TNFAIP1Q13829 316 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 SARM1Q6SZW1 724 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 BRIP1Q9BX63 1249 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 ENC1O14682 589 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 MTHFSDQ2M296 383 aaKnown RBP20.79■□□□□ 0.92
HDAC4-215ENST00000543185 DCLK2Q8N568 766 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 LPXNO60711 386 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 ARL4CP56559 192 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 TBK1Q9UHD2 729 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 PCDHA13Q9Y5I0 950 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 HNRNPDLO14979 420 aaKnown RBP20.79■□□□□ 0.92
HDAC4-215ENST00000543185 PPP2R2AP63151 447 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 TRPV6Q9H1D0 765 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 PPCSQ9HAB8 311 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 DEFA1P59665 94 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 DEFA3P59666 94 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 DNAJC24Q6P3W2 148 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 TEKT3Q9BXF9 490 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 ARL13BQ3SXY8 428 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 ARHGEF16Q5VV41 709 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 WDR62O43379 1518 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 HSPA4LO95757 839 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 ARMCX5Q6P1M9 558 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 PROM2Q8N271 834 aa20.79■□□□□ 0.92
HDAC4-215ENST00000543185 GCOM2Q9BZD3 368 aaPredicted RBP20.79■□□□□ 0.92
HDAC4-215ENST00000543185 GOLGA8MH3BSY2 632 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 TMPRSS15P98073 1019 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 BEND6Q5SZJ8 279 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-215ENST00000543185 RMDN2Q96LZ7 410 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 PARP3Q9Y6F1 533 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 KIF19Q2TAC6 998 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 OSBPL1AQ9BXW6 950 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 CDCA7Q9BWT1 371 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-215ENST00000543185 PYCARDQ9ULZ3 195 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 POLGP54098 1239 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-215ENST00000543185 TRIM67Q6ZTA4 783 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 DARS2Q6PI48 645 aaKnown RBP20.78■□□□□ 0.92
HDAC4-215ENST00000543185 SCG3Q8WXD2 468 aaKnown RBP20.78■□□□□ 0.92
HDAC4-215ENST00000543185 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 COPEO14579 308 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 RNMTO43148 476 aaKnown RBP20.78■□□□□ 0.92
HDAC4-215ENST00000543185 SKOR1P84550 965 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 NCLNQ969V3 563 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 HNRNPH2P55795 449 aaKnown RBP20.78■□□□□ 0.92
HDAC4-215ENST00000543185 MYO1EQ12965 1108 aa20.78■□□□□ 0.92
HDAC4-215ENST00000543185 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 RBM41Q96IZ5 413 aaKnown RBP20.77■□□□□ 0.92
HDAC4-215ENST00000543185 NEUROG2Q9H2A3 272 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 KRT1P04264 644 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 MAEAQ7L5Y9 396 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 COG4Q9H9E3 785 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 DDX39AO00148 427 aaKnown RBP20.77■□□□□ 0.92
HDAC4-215ENST00000543185 FAM160B1Q5W0V3 765 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 ZNF790Q6PG37 636 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 PIK3R2O00459 728 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 BASP1P80723 227 aaKnown RBP20.77■□□□□ 0.92
HDAC4-215ENST00000543185 KLC1Q07866 573 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 TBC1D1Q86TI0 1168 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-215ENST00000543185 VIPAS39Q9H9C1 493 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 ZNF219Q9P2Y4 722 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-215ENST00000543185 ZNF229Q9UJW7 825 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 ACSL3O95573 720 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms